C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000515009 SEMA6A-008 ENSG00000092421 9606 - 5:116491796-116536428 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLungOvaryPlacentaENST00000515009
Transcript ID Breast Lung Ovary Placenta
ENST00000515009 6.236±0.00 11.803±0.00 9.896±0.00 24.978±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004L9 CIL_0004L9_0001 CGP 5:116084991-116574934

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000126684 Sema6a-008 protein_coding Mus_musculus 0 758
ENSMUST00000115449 Sema6a-201 protein_coding Mus_musculus 0 697
ENSMUST00000151382 Sema6a-006 retained_intron Mus_musculus 0 697
ENSMUST00000141224 Sema6a-005 retained_intron Mus_musculus 0 697
ENSMUST00000135790 Sema6a-004 protein_coding Mus_musculus 0 697
ENSMUST00000076043 Sema6a-003 protein_coding Mus_musculus 0 697
ENSMUST00000019791 Sema6a-001 protein_coding Mus_musculus 0 697
ENSMUST00000156422 Sema6a-007 protein_coding Mus_musculus 0 695
ENSMUST00000144223 Sema6a-009 retained_intron Mus_musculus 0 366

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