| Transcript ID | Breast | Colon | Placenta | Testis |
|---|---|---|---|---|
| ENST00000524379 | 0.114±0.00 | 0.506±0.44 | 0.201±0.00 | 0.333±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | LIM domain only 1 (rhombotin 1) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000524379  |
LMO1-002 |
ENSG00000166407 |
9606 | - |
11:8224449-8263388  |
retained_intron |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0009BA | CIL_0009BA_0001 | VISTA | 11:7904499-8509136 |
| CIL_0008M3 | CIL_0008M3_0001 | VISTA | 11:7953590-8554788 |
| CIL_0009BB | CIL_0009BB_0001 | VISTA | 11:7996158-8596683 |
| CIL_00043B | CIL_00043B_0001 | CGP | 11:8106093-8268716 |
| CIL_0007LP | CIL_0007LP_0001 | UCNEbase | 11:8177826-8296591 |
| CIL_00043L | CIL_00043L_0001 | CGP | 11:8224304-8594289 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000036992
|
Lmo1-201 | protein_coding | Mus_musculus | 0 | 575 |
|
ENSDART00000044208
|
lmo1-201 | protein_coding | Danio_rerio | 0 | 381 |
|
ENSDART00000112860
|
lmo3-003 | protein_coding | Danio_rerio | 0 | 318 |
|
ENSDART00000003583
|
lmo3-001 | protein_coding | Danio_rerio | 0 | 318 |
|
ENSDART00000139655
|
lmo1-001 | protein_coding | Danio_rerio | 0 | 278 |
|
ENSDART00000134362
|
lmo3-002 | protein_coding | Danio_rerio | 0 | 220 |
|
ENSDART00000133767
|
lmo3-004 | protein_coding | Danio_rerio | 2e-28 | 130 |
