C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000528472 CTD-2028E8.1-001 ENSG00000255391 9606 - 11:87480736-87481297 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartOvaryENST00000528472
Transcript ID Breast Colon Heart Ovary
ENST00000528472 0.079±0.00 0.284±0.00 0.097±0.00 0.167±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000088874 Hmgb3-004 protein_coding Mus_musculus 0 453
ENSMUST00000114582 Hmgb3-003 protein_coding Mus_musculus 0 453
ENSMUST00000015361 Hmgb3-002 protein_coding Mus_musculus 0 453
ENSMUST00000072699 Hmgb3-001 protein_coding Mus_musculus 0 453
ENSMUST00000078030 Gm6104-201 protein_coding Mus_musculus 0 448
ENSMUST00000132145 Hmgb3-006 retained_intron Mus_musculus 0 440
ENSMUST00000121238 Gm11805-001 processed_pseudogene Mus_musculus 0 416
ENSMUST00000120072 Gm5060-001 processed_pseudogene Mus_musculus 0 416
ENSMUST00000155930 Gm8813-001 processed_pseudogene Mus_musculus 0 372
ENSMUST00000117931 Gm12365-001 processed_pseudogene Mus_musculus 0 368
ENSMUST00000123100 Hmgb3-005 protein_coding Mus_musculus 0 357
ENSMUST00000117806 Gm15576-001 processed_pseudogene Mus_musculus 0 331

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