C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 8 (sodium/calcium exchanger), member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000533541 SLC8A3-008 ENSG00000100678 9606 - 14:70046075-70080180 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartLiverPlacentaTestisENST00000533541
Transcript ID Breast Heart Liver Placenta Testis
ENST00000533541 0.060±0.00 0.022±0.00 0.010±0.00 0.019±0.01 0.017±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002M6 CIL_0002M6_0001 CGP 14:69854131-70189070
CIL_0006J1 CIL_0006J1_0002 CGP 14:70044217-70359731

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005432 IEA calcium:sodium antiporter activity
GO:0006816 IEA calcium ion transport
GO:0016020 IEA membrane
GO:0035725 IEA sodium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000182208 Slc8a3-002 protein_coding Mus_musculus 0 741
ENSMUST00000064594 Slc8a3-004 protein_coding Mus_musculus 0 741
ENSMUST00000085238 Slc8a3-001 protein_coding Mus_musculus 0 741
ENSMUST00000182366 Slc8a3-005 protein_coding Mus_musculus 0 523
ENSDART00000046800 slc8a1a-201 protein_coding Danio_rerio 0 252
ENSDART00000089803 slc8a1a-001 protein_coding Danio_rerio 0 252
ENSDART00000000804 slc8a1b-201 protein_coding Danio_rerio 3e-33 148
ENSDART00000089919 slc8a1b-202 protein_coding Danio_rerio 3e-33 148
ENSDART00000128875 slc8a1b-002 protein_coding Danio_rerio 3e-33 148
ENSDART00000151929 slc8a1b-001 protein_coding Danio_rerio 3e-33 148

Loading