| Transcript ID | Adipose | Brain | Heart |
|---|---|---|---|
| ENST00000539469 | 0.070±0.00 | 0.324±0.11 | 0.093±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | PDZ domain containing ring finger 4 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000539469  |
PDZRN4-002 |
ENSG00000165966 |
9606 | + |
12:41437683-41574332  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0003DM | CIL_0003DM_0002 | CGP | 12:40692442-41574590 |
| CIL_0009BF | CIL_0009BF_0001 | VISTA | 12:41055225-41655925 |
| CIL_0003DL | CIL_0003DL_0002 | CGP | 12:41188448-42144879 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004842 | IEA | ubiquitin-protein transferase activity |
| GO:0005515 | IEA | protein binding |
| GO:0008270 | IEA | zinc ion binding |
| GO:0016567 | IEA | protein ubiquitination |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000035399
|
Pdzrn4-201 | protein_coding | Mus_musculus | 0 | 2861 |
|
ENSMUST00000169942
|
Pdzrn4-202 | protein_coding | Mus_musculus | 0 | 2601 |
|
ENSDART00000129735
|
PDZRN4 (2 of 2)-201 | protein_coding | Danio_rerio | 7e-34 | 150 |
|
ENSMUST00000144505
|
Pdzrn3-002 | retained_intron | Mus_musculus | 5e-20 | 104 |
|
ENSMUST00000124884
|
Pdzrn3-004 | processed_transcript | Mus_musculus | 0.00000000004 | 75 |
|
ENSMUST00000075994
|
Pdzrn3-001 | protein_coding | Mus_musculus | 0.00000000004 | 75 |
