C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: tRNA methyltransferase 10 homolog B (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000540616 TRMT10B-005 ENSG00000165275 9606 + 9:37753817-37763757 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENST00000540616
Transcript ID Ovary
ENST00000540616 1.837±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006TI CIL_0006TI_0001 CGP 9:37651000-37778972
CIL_00081A CIL_00081A_0001 VISTA 9:37738698-38340102
CIL_0006TH CIL_0006TH_0001 CGP 9:37753803-37801437

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000142785 Trmt10b-007 processed_transcript Mus_musculus 0 339
ENSMUST00000141659 Trmt10b-005 processed_transcript Mus_musculus 0 263
ENSMUST00000107800 Trmt10b-002 protein_coding Mus_musculus 0 254
ENSMUST00000044673 Trmt10b-001 protein_coding Mus_musculus 0 231
ENSMUST00000144781 Trmt10b-004 protein_coding Mus_musculus 0 230
ENSMUST00000126972 Trmt10b-003 processed_transcript Mus_musculus 1e-33 147

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