C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000549176 KRT8-018 ENSG00000170421 9606 - 12:52899794-52902204 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartLiverOvaryPlacentaENST00000549176
Transcript ID Bladder Breast Colon Heart Liver Ovary Placenta
ENST00000549176 6.787±0.00 56.232±0.00 91.758±0.00 3.350±0.00 19.272±0.00 82.508±0.00 443.267±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00038V CIL_00038V_0001 CGP 12:52837804-52949954
CIL_0006T8 CIL_0006T8_0001 CGP 12:52897187-52952901

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023952 Krt8-201 protein_coding Mus_musculus 0 828
ENSMUST00000023714 4732456N10Rik-001 protein_coding Mus_musculus 0 355
ENSMUST00000068904 Krt7-001 protein_coding Mus_musculus 0 298
ENSMUST00000131069 Krt7-002 retained_intron Mus_musculus 0 248
ENSMUST00000023799 Krt79-001 protein_coding Mus_musculus 1e-36 158
ENSMUST00000147662 Krt7-003 protein_coding Mus_musculus 5e-20 102
ENSDART00000028270 gfap-001 protein_coding Danio_rerio 0.000004 57

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