C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation elongation factor 1 alpha 1 pseudogene 33
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000554413 EEF1A1P33-001 ENSG00000258846 9606 - 12:96900697-96902698 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryTestisENST00000554413
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Testis
ENST00000554413 0.009±0.00 0.309±0.00 0.046±0.00 0.054±0.00 0.050±0.00 0.008±0.00 0.009±0.00 0.073±0.00 0.008±0.00 0.080±0.00 0.062±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UU CIL_0007UU_0001 VISTA 12:96774925-97377311

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042235 Eef1a1-001 protein_coding Mus_musculus 0 915
ENSMUST00000118928 Gm13456-001 processed_pseudogene Mus_musculus 0 887
ENSMUST00000187672 RP23-307G23.3-001 processed_pseudogene Mus_musculus 0 874
ENSMUST00000167498 Gm6548-001 processed_pseudogene Mus_musculus 0 832
ENSMUST00000118650 Gm6767-001 processed_pseudogene Mus_musculus 0 809
ENSMUST00000161562 Gm5822-001 processed_pseudogene Mus_musculus 0 723
ENSMUST00000121596 Gm12912-001 processed_pseudogene Mus_musculus 0 713
ENSMUST00000143570 Eef1a1-007 processed_transcript Mus_musculus 0 399
ENSMUST00000129380 Eef1a1-004 retained_intron Mus_musculus 0 294
ENSMUST00000144523 Eef1a1-005 retained_intron Mus_musculus 0 231

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