C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: cholinergic receptor, nicotinic, alpha 3 (neuronal)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000558903 CHRNA3-008 ENSG00000080644 9606 - 15:78601776-78607524 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungENST00000558903
Transcript ID Lung
ENST00000558903 0.495±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003TW CIL_0003TW_0001 CGP 15:78540405-78595269
CIL_0003TT CIL_0003TT_0001 CGP 15:78565520-78621295
CIL_0001KZ CIL_0001KZ_0001 CGP 15:78593052-78727754

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034851 Chrna3-201 protein_coding Mus_musculus 0 627
ENSMUST00000033882 Chrna6-201 protein_coding Mus_musculus 0 285
ENSDART00000079613 chrna2b-201 protein_coding Danio_rerio 0 217
ENSDART00000136317 chrna2b-001 protein_coding Danio_rerio 0 217
ENSMUST00000029562 Chrnb2-201 protein_coding Mus_musculus 6e-23 111

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