C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SEC11 homolog A (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000559729 SEC11A-201 ENSG00000140612 9606 - 15:84669538-84716460 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000559729
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000559729 45.775±0.00 27.585±0.00 3.035±0.00 19.143±14.33 29.659±0.00 8.353±0.00 22.237±14.21 9.647±0.00 27.327±0.00 8.762±0.00 24.979±0.00 20.708±0.17 29.155±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003XQ CIL_0003XQ_0002 CGP 15:84655129-84716716
CIL_0003XP CIL_0003XP_0002 CGP 15:84669538-84806432

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006465 IEA signal peptide processing
GO:0006508 IEA proteolysis
GO:0008236 IEA serine-type peptidase activity
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000130981 Sec11a-005 retained_intron Mus_musculus 0 797
ENSMUST00000150049 Sec11a-004 processed_transcript Mus_musculus 0 795
ENSMUST00000026818 Sec11a-001 protein_coding Mus_musculus 0 793
ENSMUST00000117383 Sec11a-003 protein_coding Mus_musculus 0 449
ENSMUST00000153053 Sec11a-007 retained_intron Mus_musculus 0 403
ENSMUST00000136556 Sec11a-002 retained_intron Mus_musculus 0 287
ENSMUST00000119980 Sec11a-006 protein_coding Mus_musculus 0 287
ENSMUST00000120285 Sec11a-010 protein_coding Mus_musculus 0 268
ENSMUST00000147813 Sec11a-009 processed_transcript Mus_musculus 0 267
ENSMUST00000147881 Sec11a-008 processed_transcript Mus_musculus 0 230

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