C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003XP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000008936-ENSDARG00000060885 CGP 7955 18:26732450-26756326
GeneTranscriptPositionBiotype
ENSDARG00000008936 (sec11a)
SEC11 homolog A (S. cerevisiae) 		ENSDART00000008013 (sec11a-001) 26732450-26742090 protein_coding
ENSDARG00000060885 (znf592)
zinc finger protein 592 		ENSDART00000086250 (znf592-001) 26744428-26756326 protein_coding
CIL_0003XP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000140612-ENSG00000166716 CGP 9606 15:84669538-84806432
GeneTranscriptPositionBiotype
ENSG00000140612 (SEC11A)
SEC11 homolog A (S. cerevisiae) 		ENST00000268220 (SEC11A-001) 84669544-84716716 protein_coding
ENST00000455959 (SEC11A-002) 84669560-84716163 protein_coding
ENST00000558134 (SEC11A-008) 84669544-84716089 protein_coding
ENST00000558196 (SEC11A-003) 84680747-84716067 protein_coding
ENST00000558217 (SEC11A-009) 84669545-84716063 protein_coding
ENST00000558924 (SEC11A-006) 84669546-84673826 retained_intron
ENST00000559376 (SEC11A-007) 84669544-84671747 retained_intron
ENST00000559729 (SEC11A-201) 84669538-84716460 protein_coding
ENST00000560266 (SEC11A-004) 84669544-84716111 protein_coding
ENST00000560409 (SEC11A-005) 84669854-84716127 nonsense_mediated_decay
ENSG00000166716 (ZNF592)
zinc finger protein 592 		ENST00000299927 (ZNF592-201) 84782654-84806430 protein_coding
ENST00000559607 (ZNF592-003) 84778260-84802438 nonsense_mediated_decay
ENST00000560079 (ZNF592-001) 84748635-84806432 protein_coding
ENST00000618477 (ZNF592-004) 84803734-84804799 processed_transcript
ENSG00000259415 (RP11-7M10.2)
 ENST00000559666 (RP11-7M10.2-001) 84753122-84754502 sense_intronic
ENSG00000259654 (RP11-245C17.2)
 ENST00000558044 (RP11-245C17.2-001) 84685884-84686946 antisense
CIL_0003XP_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025724-ENSMUSG00000005621 CGP 10090 7:80904889-81045164
GeneTranscriptPositionBiotype
ENSMUSG00000005621 (Zfp592)
zinc finger protein 592 		ENSMUST00000107353 (Zfp592-001) 80993681-81045164 protein_coding
ENSMUST00000125137 (Zfp592-003) 81038015-81041453 retained_intron
ENSMUST00000149508 (Zfp592-002) 81037739-81038300 retained_intron
ENSMUST00000176477 (Zfp592-004) 81023420-81024593 processed_transcript
ENSMUSG00000025723 (Nmb)
neuromedin B 		ENSMUST00000026817 (Nmb-001) 80902228-80905076 protein_coding
ENSMUST00000119428 (Nmb-003) 80902234-80905060 protein_coding
ENSMUST00000146619 (Nmb-002) 80902227-80904393 retained_intron
ENSMUST00000149792 (Nmb-004) 80902234-80904374 retained_intron
ENSMUSG00000025724 (Sec11a)
SEC11 homolog A (S. cerevisiae) 		ENSMUST00000026818 (Sec11a-001) 80915377-80947780 protein_coding
ENSMUST00000117383 (Sec11a-003) 80915661-80947780 protein_coding
ENSMUST00000119980 (Sec11a-006) 80916089-80947780 protein_coding
ENSMUST00000120285 (Sec11a-010) 80907716-80947513 protein_coding
ENSMUST00000130981 (Sec11a-005) 80915377-80923558 retained_intron
ENSMUST00000136556 (Sec11a-002) 80920895-80947742 retained_intron
ENSMUST00000147813 (Sec11a-009) 80904889-80947545 processed_transcript
ENSMUST00000147881 (Sec11a-008) 80915763-80947511 processed_transcript
ENSMUST00000150049 (Sec11a-004) 80915377-80925650 processed_transcript
ENSMUST00000153053 (Sec11a-007) 80915566-80916330 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003XP_0001ENSDARG00000008936ENSDART00000008013ENSDARG00000060885ENSDART00000086250CIL_0003XP_0002ENSG00000140612ENST00000268220ENST00000455959ENST00000558134ENST00000558196ENST00000558217ENST00000558924ENST00000559376ENST00000559729ENST00000560266ENST00000560409ENSG00000166716ENST00000299927ENST00000559607ENST00000560079ENST00000618477ENSG00000259415ENST00000559666ENSG00000259654ENST00000558044CIL_0003XP_0003ENSMUSG00000005621ENSMUST00000107353ENSMUST00000125137ENSMUST00000149508ENSMUST00000176477ENSMUSG00000025723ENSMUST00000026817ENSMUST00000119428ENSMUST00000146619ENSMUST00000149792ENSMUSG00000025724ENSMUST00000026818ENSMUST00000117383ENSMUST00000119980ENSMUST00000120285ENSMUST00000130981ENSMUST00000136556ENSMUST00000147813ENSMUST00000147881ENSMUST00000150049ENSMUST00000153053
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003XP_0001ENSDARG00000008936ENSDART00000008013ENSDARG00000060885ENSDART00000086250CIL_0003XP_0002ENSG00000140612ENST00000268220ENST00000455959ENST00000558134ENST00000558217ENST00000559729ENST00000560266ENST00000560409ENSG00000166716ENST00000299927ENST00000559607ENST00000560079ENSG00000259415ENST00000559666ENSG00000259654ENST00000558044CIL_0003XP_0003ENSMUSG00000005621ENSMUST00000107353ENSMUSG00000025723ENSMUST00000026817ENSMUST00000119428ENSMUSG00000025724ENSMUST00000026818ENSMUST00000117383ENSMUST00000119980ENSMUST00000147881ENSMUST00000150049ENSMUST00000153053
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000008936 ENSDART00000008013 N/A N/A N/A 34.358±18.43 N/A N/A 15.639±5.60 39.831±1.26 1.999±0.00 N/A 6.100±0.00 N/A N/A N/A
ENSDARG00000060885 ENSDART00000086250 N/A N/A N/A N/A N/A N/A N/A 1.895±0.00 0.246±0.00 N/A 0.609±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000140612 ENST00000268220 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 88.749±0.00 N/A N/A
ENST00000455959 N/A N/A N/A 6.831±0.00 4.294±0.00 12.737±0.00 4.509±0.00 13.552±0.00 10.020±5.40 14.342±0.00 5.683±3.46 30.979±1.52 15.236±0.03 12.443±2.40
ENST00000558134 N/A N/A 6.338±0.00 5.730±0.00 10.240±0.00 27.299±0.00 N/A 12.237±6.29 8.430±0.00 34.403±0.00 8.216±0.00 36.538±0.00 25.642±6.91 32.089±0.00
ENST00000558196 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558217 19.461±0.00 N/A N/A 4.418±0.00 N/A 5.477±0.00 N/A 11.978±0.00 12.385±0.73 8.300±0.00 N/A 80.705±0.00 54.837±0.00 27.168±0.00
ENST00000558924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559729 45.775±0.00 27.585±0.00 3.035±0.00 N/A 19.143±14.33 29.659±0.00 8.353±0.00 22.237±14.21 9.647±0.00 27.327±0.00 8.762±0.00 24.979±0.00 20.708±0.17 29.155±0.00
ENST00000560266 17.003±0.00 20.488±0.00 N/A 17.126±0.00 26.410±0.00 N/A 13.689±8.45 N/A N/A 5.135±0.00 18.526±14.17 N/A N/A 13.531±0.00
ENST00000560409 75.007±0.00 28.292±0.00 12.850±0.00 N/A 33.013±11.68 25.329±9.74 5.127±0.00 16.303±0.00 14.441±6.13 18.785±9.02 7.385±0.00 73.489±43.28 39.688±37.73 34.922±16.88
ENSG00000166716 ENST00000299927 1.130±0.00 3.032±0.00 N/A 0.262±0.00 N/A 1.128±0.00 0.348±0.00 2.810±0.00 1.409±0.00 0.690±0.40 N/A 2.598±1.18 0.819±0.33 2.120±0.98
ENST00000559607 2.678±0.00 N/A N/A 1.832±1.31 2.545±1.56 1.088±0.00 2.293±0.00 1.503±0.00 0.826±0.00 1.777±0.00 7.193±5.17 1.909±1.09 1.758±0.72 4.319±0.00
ENST00000560079 2.066±0.00 1.239±0.00 1.658±0.00 0.571±0.36 1.703±0.21 N/A 2.066±0.00 1.565±0.09 0.775±0.33 0.307±0.00 5.120±0.00 2.538±1.64 0.964±0.55 3.870±0.00
ENST00000618477 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000259415 ENST00000559666 N/A 0.075±0.00 N/A 1.209±0.00 N/A 0.435±0.00 0.634±0.00 N/A 0.044±0.00 0.642±0.00 N/A 0.114±0.00 N/A N/A
ENSG00000259654 ENST00000558044 0.067±0.00 0.631±0.00 0.137±0.00 0.300±0.00 0.747±0.48 0.395±0.00 0.204±0.11 0.200±0.00 0.197±0.06 0.223±0.00 N/A 0.968±0.66 0.233±0.00 0.679±0.31
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000005621 ENSMUST00000107353 6.223±1.18 6.632±0.78 4.100±0.14 3.314±1.49 8.252±1.36 5.790±0.93 3.448±0.32 5.126±1.00 3.699±1.20 6.013±1.81 3.029±0.23 8.734±2.49 6.089±2.62 3.794±1.41
ENSMUST00000125137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149508 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176477 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000025723 ENSMUST00000026817 N/A 3.299±0.00 N/A N/A 3.213±0.00 N/A N/A N/A N/A N/A 4.655±0.67 5.674±0.77 N/A 4.860±0.00
ENSMUST00000119428 N/A 2.685±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146619 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000025724 ENSMUST00000026818 12.746±2.20 N/A 49.873±6.16 28.582±1.28 6.544±2.03 5.705±2.20 8.400±1.90 16.555±5.05 24.458±15.81 9.443±2.64 10.196±1.24 5.719±1.61 49.196±39.65 9.826±0.50
ENSMUST00000117383 8.919±2.44 7.742±2.71 N/A N/A 10.661±3.89 8.236±1.66 4.247±0.33 5.448±1.02 10.152±2.22 11.827±2.42 N/A 16.281±6.61 N/A 8.689±2.97
ENSMUST00000119980 N/A 14.709±3.23 N/A 13.958±0.00 6.420±1.39 10.097±3.31 N/A 6.839±0.01 7.649±2.05 N/A N/A 24.168±29.91 125.372±40.23 19.886±0.00
ENSMUST00000120285 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130981 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136556 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147813 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147881 N/A N/A N/A 9.363±0.00 10.755±0.00 N/A N/A N/A N/A N/A N/A 63.478±3.90 61.814±9.60 N/A
ENSMUST00000150049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 39.596±1.34 31.309±5.79 N/A
ENSMUST00000153053 24.465±4.25 18.309±4.20 N/A 28.839±14.23 29.408±4.46 26.758±8.08 18.259±1.51 42.540±5.99 26.976±6.03 31.484±2.79 N/A 59.815±14.11 95.483±0.00 25.750±3.57

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