C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: high mobility group box 3 pseudogene 26
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000560051 HMGB3P26-001 ENSG00000259428 9606 - 14:103364239-103364820 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartTestisENST00000560051
Transcript ID Heart Testis
ENST00000560051 0.021±0.00 0.028±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00016S CIL_00016S_0001 CGP 14:103333544-103503831

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000088874 Hmgb3-004 protein_coding Mus_musculus 0 592
ENSMUST00000114582 Hmgb3-003 protein_coding Mus_musculus 0 592
ENSMUST00000015361 Hmgb3-002 protein_coding Mus_musculus 0 592
ENSMUST00000072699 Hmgb3-001 protein_coding Mus_musculus 0 592
ENSMUST00000078030 Gm6104-201 protein_coding Mus_musculus 0 586
ENSMUST00000132145 Hmgb3-006 retained_intron Mus_musculus 0 580
ENSMUST00000121238 Gm11805-001 processed_pseudogene Mus_musculus 0 551
ENSMUST00000120072 Gm5060-001 processed_pseudogene Mus_musculus 0 516
ENSMUST00000123100 Hmgb3-005 protein_coding Mus_musculus 0 470
ENSMUST00000117931 Gm12365-001 processed_pseudogene Mus_musculus 0 455
ENSMUST00000162465 Hmgb3-ps-001 processed_pseudogene Mus_musculus 0 451

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