C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rab40B, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000124639 Rab40b-002 ENSMUSG00000025170 10090 - 11:121359591-121388221 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000IW CIL_0000IW_0002 CGP 11:121327224-121388251
CIL_0000IX CIL_0000IX_0002 CGP 11:121356125-121431288

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000087047 rab40c-001 protein_coding Danio_rerio 7e-16 88
ENST00000248139 RAB40C-001 protein_coding Homo_sapiens 8e-23 113
ENST00000269347 RAB40B-002 protein_coding Homo_sapiens 0 209
ENST00000509637 RAB40C-006 nonsense_mediated_decay Homo_sapiens 6e-23 111
ENST00000535977 RAB40C-201 protein_coding Homo_sapiens 8e-23 113
ENST00000538492 RAB40C-202 protein_coding Homo_sapiens 8e-23 113
ENST00000538809 RAB40B-005 protein_coding Homo_sapiens 0 209
ENST00000539661 RAB40C-203 protein_coding Homo_sapiens 8e-23 113
ENST00000563109 RAB40C-003 protein_coding Homo_sapiens 4e-20 102
ENST00000565511 RAB40C-004 nonsense_mediated_decay Homo_sapiens 2e-23 113
ENST00000566290 RAB40C-008 protein_coding Homo_sapiens 2e-23 113
ENST00000568586 RAB40C-009 protein_coding Homo_sapiens 2e-23 113
ENST00000569575 RAB40C-007 protein_coding Homo_sapiens 2e-23 113
ENST00000571995 RAB40B-001 protein_coding Homo_sapiens 0 209
ENST00000572603 RAB40B-006 processed_transcript Homo_sapiens 0 206

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