C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rab40C, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000166146 Rab40c-003 ENSMUSG00000025730 10090 - 17:25882114-25919556 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000218249 RAB40AL-001 protein_coding Homo_sapiens 1e-24 119
ENST00000248139 RAB40C-001 protein_coding Homo_sapiens 0 787
ENST00000269347 RAB40B-002 protein_coding Homo_sapiens 2e-28 132
ENST00000304236 RAB40A-001 protein_coding Homo_sapiens 8e-25 119
ENST00000372633 RAB40A-002 protein_coding Homo_sapiens 2e-24 119
ENST00000509637 RAB40C-006 nonsense_mediated_decay Homo_sapiens 0 213
ENST00000535977 RAB40C-201 protein_coding Homo_sapiens 0 787
ENST00000538492 RAB40C-202 protein_coding Homo_sapiens 0 787
ENST00000538809 RAB40B-005 protein_coding Homo_sapiens 6e-29 132
ENST00000539661 RAB40C-203 protein_coding Homo_sapiens 0 787
ENST00000561781 RAB40C-002 retained_intron Homo_sapiens 0 688
ENST00000563109 RAB40C-003 protein_coding Homo_sapiens 0 551
ENST00000564703 RAB40C-005 protein_coding Homo_sapiens 0 399
ENST00000565511 RAB40C-004 nonsense_mediated_decay Homo_sapiens 0 351
ENST00000566290 RAB40C-008 protein_coding Homo_sapiens 0 508
ENST00000568586 RAB40C-009 protein_coding Homo_sapiens 0 405
ENST00000569575 RAB40C-007 protein_coding Homo_sapiens 0 268
ENST00000571995 RAB40B-001 protein_coding Homo_sapiens 3e-28 132
ENST00000572603 RAB40B-006 processed_transcript Homo_sapiens 3e-29 132

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