C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 17 pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000581146 KRT17P2-004 ENSG00000186831 9606 + 17:18430227-18431222 retained_intron

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastLungOvaryPlacentaTestisENST00000581146
Transcript ID Adrenal Brain Breast Lung Ovary Placenta Testis
ENST00000581146 0.054±0.00 0.460±0.30 4.075±0.00 0.092±0.03 0.376±0.44 0.083±0.01 0.661±0.62

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000080893 Krt17-001 protein_coding Mus_musculus 0 507
ENSMUST00000007272 Krt14-001 protein_coding Mus_musculus 0 444
ENSMUST00000137265 Krt14-002 processed_transcript Mus_musculus 0 444
ENSMUST00000007280 Krt16-001 protein_coding Mus_musculus 0 265
ENSMUST00000121423 Gm11597-001 unprocessed_pseudogene Mus_musculus 0 248
ENSMUST00000017270 Krt42-001 protein_coding Mus_musculus 0 215
ENSMUST00000107406 Krt42-002 retained_intron Mus_musculus 0 215
ENSMUST00000126460 Krt19-002 processed_transcript Mus_musculus 4.00001e-41 172
ENSMUST00000007317 Krt19-001 protein_coding Mus_musculus 4.00001e-41 172

Loading