C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11597
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121423 Gm11597-001 ENSMUSG00000084257 10090 - 11:100228845-100232078 unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENSMUST00000121423
Transcript ID Brain
ENSMUST00000121423 0.004±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056U CIL_00056U_0012 CGP 11:100203162-100248902

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000099835 zgc:92380-202 protein_coding Danio_rerio 0.0000004 60
ENSDART00000060593 zgc:92380-201 protein_coding Danio_rerio 0.0000004 60
ENSDART00000113883 zgc:92380-203 protein_coding Danio_rerio 0.0000004 60
ENST00000167586 KRT14-001 protein_coding Homo_sapiens 0 732
ENST00000254043 KRT15-001 protein_coding Homo_sapiens 0 357
ENST00000300992 KRT17P2-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 466
ENST00000301653 KRT16-001 protein_coding Homo_sapiens 0 935
ENST00000311208 KRT17-001 protein_coding Homo_sapiens 0 588
ENST00000326333 KRT17P2-002 processed_transcript Homo_sapiens 0 316
ENST00000361566 KRT19-001 protein_coding Homo_sapiens 0 198
ENST00000393974 KRT15-004 protein_coding Homo_sapiens 0 302
ENST00000393976 KRT15-007 protein_coding Homo_sapiens 0 357
ENST00000399211 KRT17P1-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 501
ENST00000420566 KRT17P3-001 unprocessed_pseudogene Homo_sapiens 0 505
ENST00000458290 KRT15-006 protein_coding Homo_sapiens 0 261
ENST00000463447 KRT15-005 retained_intron Homo_sapiens 0 252
ENST00000468880 KRT19-005 retained_intron Homo_sapiens 0.000001 58
ENST00000474031 KRT15-008 retained_intron Homo_sapiens 0 302
ENST00000476662 KRT14-003 retained_intron Homo_sapiens 0 564
ENST00000493253 KRT17-003 retained_intron Homo_sapiens 0 383
ENST00000540235 KRT17-201 protein_coding Homo_sapiens 0 579
ENST00000581146 KRT17P2-004 retained_intron Homo_sapiens 0 248
ENST00000582047 KRT17P1-004 retained_intron Homo_sapiens 0 248
ENST00000584769 KRT17P2-003 processed_transcript Homo_sapiens 0 326
ENST00000593067 KRT16-003 protein_coding Homo_sapiens 0 837

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