C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 17 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000582047 KRT17P1-004 ENSG00000131885 9606 - 17:16841539-16842449 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLungOvaryTestisENST00000582047
Transcript ID Breast Lung Ovary Testis
ENST00000582047 0.736±0.00 0.088±0.01 0.141±0.00 0.141±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000080893 Krt17-001 protein_coding Mus_musculus 0 512
ENSMUST00000007272 Krt14-001 protein_coding Mus_musculus 0 444
ENSMUST00000137265 Krt14-002 processed_transcript Mus_musculus 0 444
ENSMUST00000007280 Krt16-001 protein_coding Mus_musculus 0 265
ENSMUST00000121423 Gm11597-001 unprocessed_pseudogene Mus_musculus 0 248
ENSMUST00000017270 Krt42-001 protein_coding Mus_musculus 0 215
ENSMUST00000107406 Krt42-002 retained_intron Mus_musculus 0 215
ENSMUST00000126460 Krt19-002 processed_transcript Mus_musculus 3.00004e-41 172
ENSMUST00000007317 Krt19-001 protein_coding Mus_musculus 3.00004e-41 172

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