| Transcript ID | Testis |
|---|---|
| ENST00000589872 | 42.167±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | neighbor of BRCA1 gene 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000589872  |
NBR1-004 |
ENSG00000188554 |
9606 | + |
17:43171243-43209857  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00040M | CIL_00040M_0001 | CGP | 17:43044295-43211689 |
| CIL_0000KX | CIL_0000KX_0002 | CGP | 17:43170481-43220041 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IPI:IEA | protein binding |
| GO:0005764 | IEA | lysosome |
| GO:0005770 | ISS | late endosome |
| GO:0005776 | ISS | autophagic vacuole |
| GO:0005829 | IDA | cytosol |
| GO:0008270 | IEA | zinc ion binding |
| GO:0016020 | IDA | membrane |
| GO:0016236 | IDA | macroautophagy |
| GO:0030500 | ISS | regulation of bone mineralization |
| GO:0031410 | IEA | cytoplasmic vesicle |
| GO:0032872 | ISS | regulation of stress-activated MAPK cascade |
| GO:0043130 | IDA | ubiquitin binding |
| GO:0045668 | ISS | negative regulation of osteoblast differentiation |
| GO:0051019 | ISS | mitogen-activated protein kinase binding |
| GO:0051259 | IDA | protein oligomerization |
| GO:0070062 | IDA | extracellular vesicular exosome |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000107212
|
Nbr1-015 | protein_coding | Mus_musculus | 0 | 2983 |
|
ENSMUST00000107218
|
Nbr1-202 | protein_coding | Mus_musculus | 0 | 2327 |
|
ENSMUST00000107208
|
Nbr1-005 | protein_coding | Mus_musculus | 0 | 2327 |
|
ENSMUST00000123558
|
Nbr1-004 | nonsense_mediated_decay | Mus_musculus | 0 | 2327 |
|
ENSMUST00000103098
|
Nbr1-002 | protein_coding | Mus_musculus | 0 | 2327 |
|
ENSMUST00000103099
|
Nbr1-001 | protein_coding | Mus_musculus | 0 | 2327 |
|
ENSMUST00000071537
|
Nbr1-201 | protein_coding | Mus_musculus | 0 | 2283 |
|
ENSMUST00000107213
|
Nbr1-003 | protein_coding | Mus_musculus | 0 | 1973 |
|
ENSMUST00000149019
|
Nbr1-006 | protein_coding | Mus_musculus | 0 | 1498 |
|
ENSMUST00000174013
|
Nbr1-017 | retained_intron | Mus_musculus | 0 | 475 |
|
ENSMUST00000127871
|
Nbr1-009 | retained_intron | Mus_musculus | 0 | 455 |
|
ENSMUST00000148805
|
Nbr1-012 | retained_intron | Mus_musculus | 0 | 372 |
|
ENSMUST00000172744
|
Nbr1-018 | retained_intron | Mus_musculus | 0 | 361 |
|
ENSMUST00000146452
|
Nbr1-008 | retained_intron | Mus_musculus | 0 | 289 |
|
ENSMUST00000147239
|
Nbr1-014 | protein_coding | Mus_musculus | 0 | 222 |
|
ENSMUST00000127421
|
Nbr1-016 | protein_coding | Mus_musculus | 0 | 220 |
|
ENSMUST00000144517
|
Nbr1-011 | processed_transcript | Mus_musculus | 0 | 209 |
|
ENSMUST00000141170
|
Nbr1-013 | retained_intron | Mus_musculus | 3.00018e-42 | 178 |
|
ENSMUST00000136185
|
Nbr1-007 | nonsense_mediated_decay | Mus_musculus | 5e-40 | 171 |
