C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000IW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000141580-ENSG00000141542 CGP 9606 17:82614562-82698728
GeneTranscriptPositionBiotype
ENSG00000141542 (RAB40B)
RAB40B, member RAS oncogene family 		ENST00000269347 (RAB40B-002) 82657067-82698687 protein_coding
ENST00000538809 (RAB40B-005) 82657911-82698662 protein_coding
ENST00000570676 (RAB40B-008) 82657793-82664895 retained_intron
ENST00000571554 (RAB40B-007) 82661011-82696870 processed_transcript
ENST00000571880 (RAB40B-012) 82655037-82656881 processed_transcript
ENST00000571995 (RAB40B-001) 82654973-82698728 protein_coding
ENST00000572603 (RAB40B-006) 82661081-82698654 processed_transcript
ENST00000573395 (RAB40B-011) 82657977-82658849 retained_intron
ENST00000574132 (RAB40B-009) 82657706-82659759 retained_intron
ENST00000576148 (RAB40B-010) 82657915-82661031 protein_coding
ENST00000576359 (RAB40B-003) 82657068-82659589 retained_intron
ENSG00000141568 (FOXK2)
forkhead box K2 		ENST00000335255 (FOXK2-001) 82519715-82604607 protein_coding
ENST00000473637 (FOXK2-002) 82519713-82602392 nonsense_mediated_decay
ENST00000526383 (FOXK2-005) 82559364-82584030 protein_coding
ENST00000527313 (FOXK2-006) 82519977-82571976 retained_intron
ENST00000529652 (FOXK2-003) 82593422-82602405 processed_transcript
ENST00000531030 (FOXK2-004) 82559340-82582914 protein_coding
ENST00000570585 (FOXK2-009) 82520294-82572122 retained_intron
ENST00000571160 (FOXK2-010) 82582775-82586043 processed_transcript
ENST00000571989 (FOXK2-012) 82593400-82601530 processed_transcript
ENST00000574694 (FOXK2-013) 82603637-82644662 processed_transcript
ENST00000575578 (FOXK2-011) 82586130-82587562 protein_coding
ENST00000622867 (FOXK2-201) 82519713-82602392 protein_coding
ENST00000624186 (FOXK2-008) 82598939-82603182 TEC
ENSG00000141580 (WDR45B)
WD repeat domain 45B 		ENST00000392325 (WDR45B-001) 82614562-82648535 protein_coding
ENST00000571767 (WDR45B-008) 82617354-82625959 processed_transcript
ENST00000571817 (WDR45B-005) 82619064-82648448 nonsense_mediated_decay
ENST00000571835 (WDR45B-007) 82616015-82636583 processed_transcript
ENST00000572583 (WDR45B-002) 82614576-82648318 nonsense_mediated_decay
ENST00000573616 (WDR45B-006) 82616524-82648444 nonsense_mediated_decay
ENST00000573656 (WDR45B-009) 82615986-82625535 retained_intron
ENST00000574828 (WDR45B-004) 82626789-82648553 processed_transcript
ENST00000576517 (WDR45B-010) 82614582-82619084 nonsense_mediated_decay
ENST00000577774 (WDR45B-011) 82616618-82617519 retained_intron
ENSG00000279613 (RP13-638C3.5)
 ENST00000624661 (RP13-638C3.5-001) 82648849-82650657 TEC
CIL_0000IW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025173-ENSMUSG00000025170 CGP 10090 11:121327224-121388251
GeneTranscriptPositionBiotype
ENSMUSG00000025170 (Rab40b)
Rab40B, member RAS oncogene family 		ENSMUST00000106107 (Rab40b-001) 121356125-121388251 protein_coding
ENSMUST00000124639 (Rab40b-002) 121359591-121388221 processed_transcript
ENSMUST00000135290 (Rab40b-003) 121359610-121388230 processed_transcript
ENSMUST00000149948 (Rab40b-004) 121358002-121388065 processed_transcript
ENSMUSG00000025173 (Wdr45b)
WD repeat domain 45B 		ENSMUST00000026173 (Wdr45b-001) 121327224-121354445 protein_coding
ENSMUST00000106110 (Wdr45b-004) 121331093-121354341 protein_coding
ENSMUST00000127373 (Wdr45b-003) 121347027-121354401 retained_intron
ENSMUST00000136797 (Wdr45b-002) 121335384-121354393 protein_coding
ENSMUST00000137230 (Wdr45b-005) 121328232-121341188 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000IW_0001ENSG00000141542ENST00000269347ENST00000538809ENST00000571995ENST00000574132ENST00000576359ENSG00000141568ENST00000335255ENST00000473637ENSG00000141580ENST00000392325ENST00000572583ENSG00000279613ENST00000624661CIL_0000IW_0002ENSMUSG00000025170ENSMUST00000106107ENSMUST00000135290ENSMUST00000149948ENSMUSG00000025173ENSMUST00000026173ENSMUST00000106110ENSMUST00000136797
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000141542 ENST00000269347 2.023±0.00 1.695±0.00 N/A 15.962±0.41 3.103±2.81 2.779±1.32 4.680±3.22 5.892±4.41 1.537±0.00 1.382±0.69 3.119±0.06 3.827±1.40 1.465±0.61 3.993±1.88
ENST00000538809 N/A N/A 3.003±0.00 31.907±0.00 0.551±0.00 2.776±0.00 3.762±0.00 N/A 4.212±0.00 1.636±0.00 16.996±0.00 3.550±0.00 N/A N/A
ENST00000570676 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571880 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571995 N/A 0.905±0.00 N/A 2.257±0.00 1.193±0.00 N/A N/A N/A 0.639±0.00 N/A 0.775±0.00 1.746±0.78 0.477±0.16 N/A
ENST00000572603 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574132 N/A N/A N/A 21.825±0.00 0.381±0.00 N/A N/A N/A N/A 3.605±0.00 3.446±0.00 2.593±0.00 N/A N/A
ENST00000576148 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576359 N/A N/A N/A 3.989±0.00 N/A N/A N/A 1.057±0.00 0.504±0.00 N/A N/A 6.946±0.00 N/A 1.546±0.00
ENSG00000141568 ENST00000335255 N/A 3.294±0.00 N/A 2.525±0.00 1.746±0.95 1.912±0.90 2.192±1.08 5.049±0.00 0.966±0.00 1.367±0.00 2.906±1.62 3.483±1.81 5.055±0.09 N/A
ENST00000473637 10.345±0.00 6.725±0.00 N/A N/A 6.922±0.00 4.453±2.65 7.436±0.00 N/A 2.641±1.37 15.310±0.00 6.682±5.31 8.614±5.38 8.582±0.33 20.050±0.54
ENST00000526383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527313 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529652 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531030 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570585 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571160 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575578 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622867 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000624186 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000141580 ENST00000392325 6.823±0.00 6.983±0.00 2.399±0.00 9.780±4.24 5.799±2.43 5.307±0.82 4.910±3.40 9.212±5.04 5.251±0.13 7.592±0.00 7.262±0.00 12.170±6.42 12.680±3.04 30.332±18.56
ENST00000571767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571817 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571835 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572583 N/A 7.774±0.00 N/A 15.986±9.37 16.704±0.00 8.506±0.00 7.069±0.00 17.788±0.00 5.451±0.00 7.738±1.14 N/A 14.303±2.75 7.048±1.18 22.798±5.49
ENST00000573616 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573656 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576517 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000279613 ENST00000624661 0.014±0.00 0.146±0.00 N/A 0.083±0.00 0.033±0.00 0.029±0.00 0.015±0.00 0.125±0.00 0.040±0.00 0.015±0.00 N/A 0.164±0.11 0.041±0.00 0.784±0.60
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025170 ENSMUST00000106107 4.611±0.29 5.757±0.51 1.939±0.29 3.584±2.08 4.111±1.77 1.367±0.56 0.901±0.23 1.114±0.43 0.318±0.09 1.464±0.15 7.575±0.63 2.906±1.19 0.160±0.11 0.190±0.10
ENSMUST00000124639 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135290 N/A 7.334±0.00 N/A N/A N/A N/A N/A N/A 0.334±0.02 N/A N/A N/A N/A N/A
ENSMUST00000149948 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.145±0.00 N/A
ENSMUSG00000025173 ENSMUST00000026173 27.211±3.76 35.275±2.43 25.383±3.75 21.902±11.06 14.419±6.65 15.722±8.82 15.992±1.57 19.269±5.54 15.143±4.64 20.902±5.80 7.118±1.14 29.695±13.50 26.497±7.12 14.119±1.13
ENSMUST00000106110 N/A N/A N/A 21.476±0.00 N/A N/A N/A N/A N/A N/A N/A 25.065±0.00 30.726±8.74 6.431±0.00
ENSMUST00000127373 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136797 N/A N/A N/A N/A N/A N/A N/A N/A 21.106±0.00 16.558±0.00 N/A N/A N/A N/A
ENSMUST00000137230 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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