C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00011Z_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000175221-ENSG00000198858 CGP 9606 19:867630-913245
GeneTranscriptPositionBiotype
ENSG00000175221 (MED16)
mediator complex subunit 16 		ENST00000269814 (MED16-201) 867964-893200 protein_coding
ENST00000312090 (MED16-003) 867853-893193 protein_coding
ENST00000325464 (MED16-202) 867964-893218 protein_coding
ENST00000395808 (MED16-001) 867630-893218 protein_coding
ENST00000586017 (MED16-011) 873536-891148 protein_coding
ENST00000586342 (MED16-004) 890984-892815 protein_coding
ENST00000589119 (MED16-006) 867963-891131 protein_coding
ENST00000592373 (MED16-020) 885822-893158 nonsense_mediated_decay
ENST00000592943 (MED16-005) 873536-891148 protein_coding
ENST00000606248 (MED16-023) 867964-893216 nonsense_mediated_decay
ENST00000606828 (MED16-002) 873536-891148 protein_coding
ENST00000607471 (MED16-021) 867963-885909 protein_coding
ENST00000616387 (MED16-203) 867972-891148 protein_coding
ENST00000617672 (MED16-204) 867972-891148 protein_coding
ENST00000621073 (MED16-039) 867963-871066 protein_coding
ENSG00000198858 (R3HDM4)
R3H domain containing 4 		ENST00000361574 (R3HDM4-001) 896503-913231 protein_coding
ENST00000586080 (R3HDM4-006) 899644-901236 retained_intron
ENST00000587975 (R3HDM4-003) 896504-913245 protein_coding
ENST00000589428 (R3HDM4-002) 896503-913245 nonsense_mediated_decay
ENST00000589445 (R3HDM4-007) 901491-913151 retained_intron
ENST00000590454 (R3HDM4-004) 900078-913204 nonsense_mediated_decay
ENST00000591829 (R3HDM4-005) 897519-902410 processed_transcript
CIL_00011Z_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000013833-ENSMUSG00000035781 CGP 10090 10:79894708-79917006
GeneTranscriptPositionBiotype
ENSMUSG00000013833 (Med16)
mediator complex subunit 16 		ENSMUST00000105378 (Med16-001) 79894708-79908921 protein_coding
ENSMUST00000163125 (Med16-002) 79901838-79908818 retained_intron
ENSMUST00000164705 (Med16-005) 79903179-79908910 protein_coding
ENSMUST00000165684 (Med16-003) 79894935-79908898 protein_coding
ENSMUST00000166964 (Med16-006) 79903355-79908321 protein_coding
ENSMUST00000170375 (Med16-007) 79898236-79899685 retained_intron
ENSMUST00000170409 (Med16-004) 79903382-79908923 protein_coding
ENSMUSG00000035773 (Kiss1r)
KISS1 receptor 		ENSMUST00000045529 (Kiss1r-201) 79916971-79922273 protein_coding
ENSMUSG00000035781 (R3hdm4)
R3H domain containing 4 		ENSMUST00000045628 (R3hdm4-201) 79910053-79916930 protein_coding
ENSMUST00000171416 (R3hdm4-202) 79910238-79917006 protein_coding
ENSMUSG00000095023 (Gm24019)
predicted gene, 24019 		ENSMUST00000178620 (Gm24019-201) 79909195-79909301 snRNA
ENSMUSG00000097854 (Gm26602)
predicted gene, 26602 		ENSMUST00000181321 (Gm26602-201) 79910856-79911140 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00011Z_0001ENSG00000175221ENST00000269814ENST00000312090ENST00000325464ENST00000395808ENST00000586017ENST00000586342ENST00000589119ENST00000592373ENST00000592943ENST00000606248ENST00000606828ENST00000607471ENST00000616387ENST00000617672ENST00000621073ENSG00000198858ENST00000361574ENST00000586080ENST00000587975ENST00000589428ENST00000589445ENST00000590454ENST00000591829CIL_00011Z_0002ENSMUSG00000013833ENSMUST00000105378ENSMUST00000163125ENSMUST00000164705ENSMUST00000165684ENSMUST00000166964ENSMUST00000170375ENSMUST00000170409ENSMUSG00000035773ENSMUST00000045529ENSMUSG00000035781ENSMUST00000045628ENSMUST00000171416ENSMUSG00000095023ENSMUST00000178620ENSMUSG00000097854ENSMUST00000181321
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00011Z_0001ENSG00000175221ENST00000269814ENST00000312090ENST00000325464ENST00000395808ENST00000586017ENST00000589119ENST00000592373ENST00000592943ENST00000606248ENST00000607471ENSG00000198858ENST00000361574ENST00000587975ENST00000589428ENST00000590454ENST00000591829CIL_00011Z_0002ENSMUSG00000013833ENSMUST00000105378ENSMUST00000163125ENSMUST00000165684ENSMUSG00000035773ENSMUST00000045529ENSMUSG00000035781ENSMUST00000045628ENSMUSG00000095023ENSMUST00000178620ENSMUSG00000097854ENSMUST00000181321
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000175221 ENST00000269814 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.676±0.00 N/A N/A N/A N/A
ENST00000312090 3.245±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 2.179±0.00 N/A 8.468±0.00 N/A N/A
ENST00000325464 N/A 8.912±0.00 1.047±0.00 0.947±0.00 N/A N/A N/A 7.016±3.61 2.514±1.32 N/A 4.676±1.46 10.443±10.15 9.209±3.42 12.082±5.42
ENST00000395808 9.510±0.00 N/A N/A 1.796±0.00 13.164±0.00 N/A 2.538±0.00 N/A N/A 1.239±0.72 N/A 11.834±5.93 N/A N/A
ENST00000586017 N/A N/A N/A 0.909±0.00 2.159±0.00 2.439±0.00 N/A N/A N/A N/A 1.817±0.00 1.131±0.00 N/A N/A
ENST00000586342 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589119 N/A N/A 0.467±0.00 4.540±0.00 N/A 3.688±0.00 2.663±0.00 6.942±0.00 4.528±0.00 6.591±0.00 12.967±0.00 13.813±0.00 16.037±3.57 N/A
ENST00000592373 N/A N/A N/A N/A 0.991±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592943 N/A N/A N/A 1.228±0.00 1.042±0.00 N/A 0.467±0.00 N/A N/A 1.082±0.00 1.387±0.00 N/A N/A N/A
ENST00000606248 N/A 4.073±0.00 N/A 2.244±0.00 N/A 5.262±0.00 0.266±0.00 N/A N/A N/A N/A 6.364±0.00 N/A N/A
ENST00000606828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000607471 N/A 8.561±0.00 N/A 2.164±1.41 N/A 2.084±1.67 0.226±0.00 5.346±0.00 4.284±0.00 2.142±1.69 10.331±0.00 20.934±0.00 20.108±9.30 20.670±7.45
ENST00000616387 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617672 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621073 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000198858 ENST00000361574 12.199±0.00 N/A 0.909±0.00 1.891±0.70 2.206±0.00 2.794±1.96 2.395±2.00 3.522±0.00 3.982±3.43 16.849±14.91 24.231±0.00 23.431±9.30 35.127±12.36 3.718±0.56
ENST00000586080 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587975 24.680±0.00 39.037±0.00 N/A 10.865±0.00 17.092±0.00 22.923±0.00 7.318±0.00 19.333±0.00 6.953±0.00 39.919±0.00 N/A 13.516±0.00 N/A 11.393±0.00
ENST00000589428 N/A 20.428±0.00 N/A 6.143±0.00 6.582±0.00 N/A N/A 3.695±2.11 1.369±0.92 N/A 5.264±4.89 0.363±0.00 N/A N/A
ENST00000589445 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590454 N/A N/A N/A N/A N/A 0.442±0.00 N/A N/A 0.246±0.00 0.524±0.00 1.024±0.00 0.592±0.00 N/A N/A
ENST00000591829 N/A N/A 1.321±0.00 0.783±0.00 1.183±0.00 N/A N/A N/A N/A N/A N/A 0.511±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000013833 ENSMUST00000105378 8.420±2.04 8.615±4.36 3.843±0.08 5.343±1.21 10.362±2.54 10.532±5.55 6.792±0.97 10.840±2.48 4.261±2.06 11.995±5.05 1.899±0.66 20.862±7.60 3.259±0.56 16.547±9.51
ENSMUST00000163125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.397±0.00
ENSMUST00000164705 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165684 11.550±2.73 12.187±5.02 12.876±0.82 8.266±3.25 9.235±5.90 12.027±3.75 11.753±2.12 11.972±1.52 6.670±2.16 8.706±0.87 5.651±0.96 14.411±6.09 6.514±3.67 23.726±13.13
ENSMUST00000166964 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170375 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170409 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000035773 ENSMUST00000045529 N/A 3.139±0.01 N/A N/A N/A N/A N/A N/A N/A 5.404±0.05 N/A N/A N/A N/A
ENSMUSG00000035781 ENSMUST00000045628 52.144±2.42 59.172±3.97 60.544±0.15 80.652±23.36 59.628±4.99 122.247±20.01 38.576±6.51 52.439±5.40 29.601±5.51 51.875±3.79 48.503±3.68 68.562±26.63 26.622±5.05 5.136±2.44
ENSMUST00000171416 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000095023 ENSMUST00000178620 N/A N/A 24.289±0.00 9.613±3.52 N/A N/A N/A N/A 18.620±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000097854 ENSMUST00000181321 N/A 296.845±62.56 N/A N/A N/A 462.922±56.72 N/A 174.169±4.58 96.000±7.44 N/A 54.541±4.54 100.741±9.42 129.275±14.77 N/A

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