C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein A1 pseudogene 35
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000429216 HNRNPA1P35-001 ENSG00000225695 9606 + 2:201063089-201064051 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000429216
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000429216 0.236±0.00 0.512±0.00 0.191±0.06 0.180±0.02 0.320±0.20 0.108±0.01 0.111±0.04 0.108±0.04 0.104±0.04 0.090±0.00 0.201±0.16 0.032±0.01 0.054±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002AT CIL_0002AT_0001 CGP 2:200908973-201071671
CIL_0002AU CIL_0002AU_0001 CGP 2:200973718-201085750

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000087351 Hnrnpa1-202 protein_coding Mus_musculus 0 1314
ENSMUST00000168019 Gm10052-001 processed_pseudogene Mus_musculus 0 1312
ENSMUST00000117081 Gm5643-001 processed_pseudogene Mus_musculus 0 1254
ENSMUST00000022493 Gm5803-001 processed_pseudogene Mus_musculus 0 1225
ENSMUST00000129154 Hnrnpa1l2-ps-001 processed_pseudogene Mus_musculus 0 1210
ENSMUST00000181363 Gm8652-001 processed_pseudogene Mus_musculus 0 1190
ENSMUST00000040649 AC165425.1-201 pseudogene Mus_musculus 0 1053
ENSMUST00000050143 Gm7729-001 unprocessed_pseudogene Mus_musculus 0 1024
ENSMUST00000036004 Hnrnpa1-201 protein_coding Mus_musculus 0 1024
ENSMUST00000118970 Gm16216-001 processed_pseudogene Mus_musculus 0 985
ENSMUST00000184038 Gm5269-001 translated_processed_pseudogene Mus_musculus 0 852
ENSMUST00000178732 RP24-383H12.1-001 processed_pseudogene Mus_musculus 0 771
ENSMUST00000120205 Gm13297-001 processed_pseudogene Mus_musculus 0 743
ENSMUST00000189260 RP23-389M9.4-001 processed_pseudogene Mus_musculus 0 549
ENSMUST00000122005 Gm12382-001 processed_pseudogene Mus_musculus 0 549
ENSMUST00000119387 Gm12458-001 processed_pseudogene Mus_musculus 0 518
ENSMUST00000166043 Gm17082-001 processed_pseudogene Mus_musculus 0 333

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