C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11425
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119608 Gm11425-001 ENSMUSG00000082419 10090 - 11:83027500-83027997 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000119608
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000119608 0.201±0.10 0.155±0.00 0.741±0.36 0.619±0.40 0.385±0.16 0.300±0.00 0.253±0.01 0.204±0.12 0.412±0.48 0.218±0.00 0.105±0.00 0.204±0.10 0.115±0.03 1.527±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003RF CIL_0003RF_0003 CGP 11:83002158-83070678

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310055 RP11-344H11.4-001 unprocessed_pseudogene Homo_sapiens 0 497
ENST00000374520 RPL12P1-001 processed_pseudogene Homo_sapiens 0 560
ENST00000406185 RP11-480N24.3-001 processed_pseudogene Homo_sapiens 6e-36 152
ENST00000424565 RPL12P2-001 processed_pseudogene Homo_sapiens 0 525
ENST00000424633 RPL12L3-001 processed_pseudogene Homo_sapiens 0 588
ENST00000425565 RPL12P29-001 processed_pseudogene Homo_sapiens 0 320
ENST00000428087 RP11-248I9.2-001 processed_pseudogene Homo_sapiens 0 191
ENST00000431782 RP11-169K16.6-001 processed_pseudogene Homo_sapiens 0 494
ENST00000432393 AC093698.2-001 processed_pseudogene Homo_sapiens 0 510
ENST00000432629 RPL12P4-001 processed_pseudogene Homo_sapiens 0 608
ENST00000439896 RPL12P1-001 processed_pseudogene Homo_sapiens 0 555
ENST00000448702 RPL12P1-001 processed_pseudogene Homo_sapiens 0 560
ENST00000467671 KIFC1-003 processed_transcript Homo_sapiens 0 462
ENST00000471280 RPL12P38-001 transcribed_processed_pseudogene Homo_sapiens 0 547
ENST00000472214 CTB-46B19.1-001 processed_pseudogene Homo_sapiens 0 433
ENST00000477007 RP11-106M3.1-001 processed_pseudogene Homo_sapiens 0 553
ENST00000481802 CTC-250I14.1-001 processed_pseudogene Homo_sapiens 0 510
ENST00000482081 RPL12P8-001 processed_pseudogene Homo_sapiens 0 529
ENST00000484010 RP11-428G5.2-001 processed_pseudogene Homo_sapiens 0 486
ENST00000485633 RPL12P33-001 processed_pseudogene Homo_sapiens 0 510
ENST00000486695 KIFC1-003 retained_intron Homo_sapiens 0 462
ENST00000486874 RPL12P37-001 processed_pseudogene Homo_sapiens 0 475
ENST00000492999 KIFC1-003 processed_transcript Homo_sapiens 0 457
ENST00000495231 RP11-434O22.1-001 processed_pseudogene Homo_sapiens 0 544
ENST00000588627 RPL12P38-002 processed_transcript Homo_sapiens 0 547
ENST00000603116 RP4-741O10.1-001 processed_pseudogene Homo_sapiens 2e-30 134

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