C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003SR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000150457-ENSG00000150459 CGP 9606 13:20973032-21149084
GeneTranscriptPositionBiotype
ENSG00000150457 (LATS2)
large tumor suppressor kinase 2 		ENST00000382592 (LATS2-001) 20973032-21061547 protein_coding
ENST00000472754 (LATS2-003) 20989010-21023129 processed_transcript
ENSG00000150459 (SAP18)
Sin3A-associated protein, 18kDa 		ENST00000382533 (SAP18-001) 21140514-21149082 protein_coding
ENST00000450573 (SAP18-008) 21140774-21147319 protein_coding
ENST00000467636 (SAP18-005) 21140886-21147603 protein_coding
ENST00000471009 (SAP18-007) 21146464-21147391 processed_transcript
ENST00000485646 (SAP18-004) 21140612-21141619 processed_transcript
ENST00000492245 (SAP18-006) 21140615-21147413 protein_coding
ENST00000607003 (SAP18-009) 21140578-21149082 protein_coding
ENST00000621421 (SAP18-201) 21140514-21149084 protein_coding
ENSG00000180172 (RPS12P23)
ribosomal protein S12 pseudogene 23 		ENST00000419579 (RPS12P23-001) 21094318-21094714 processed_pseudogene
ENSG00000225585 (IPPKP1)
inositol 1,3,4,5,6-pentakisphosphate 2-kinase pseudogene 1 		ENST00000422501 (IPPKP1-001) 21103003-21104371 processed_pseudogene
ENSG00000233851 (LATS2-AS1)
LATS2 antisense RNA 1 		ENST00000422510 (LATS2-AS1-001) 21005157-21018122 antisense
ENSG00000252128 (SNORD27)
Small nucleolar RNA SNORD27 		ENST00000516319 (SNORD27.1-201) 21139886-21139957 snoRNA
CIL_0003SR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021959-ENSMUSG00000021963 CGP 10090 14:57642077-57804980
GeneTranscriptPositionBiotype
ENSMUSG00000021952 (Xpo4)
exportin 4 		ENSMUST00000089482 (Xpo4-201) 57582271-57664956 protein_coding
ENSMUST00000172524 (Xpo4-003) 57642029-57665430 nonsense_mediated_decay
ENSMUST00000172539 (Xpo4-008) 57641779-57664964 processed_transcript
ENSMUST00000172647 (Xpo4-007) 57642516-57648657 retained_intron
ENSMUST00000173172 (Xpo4-005) 57641800-57664967 retained_intron
ENSMUST00000173638 (Xpo4-006) 57647962-57664989 retained_intron
ENSMUST00000173940 (Xpo4-004) 57641785-57665235 retained_intron
ENSMUST00000174152 (Xpo4-002) 57596990-57664992 nonsense_mediated_decay
ENSMUST00000174424 (Xpo4-009) 57629448-57664956 nonsense_mediated_decay
ENSMUST00000174545 (Xpo4-001) 57581002-57665430 protein_coding
ENSMUSG00000021959 (Lats2)
large tumor suppressor 2 		ENSMUST00000022531 (Lats2-001) 57689662-57746123 protein_coding
ENSMUST00000038381 (Lats2-005) 57722189-57734300 protein_coding
ENSMUST00000077981 (Lats2-006) 57722189-57734300 protein_coding
ENSMUST00000173077 (Lats2-008) 57734253-57746578 processed_transcript
ENSMUST00000173732 (Lats2-009) 57734180-57744654 protein_coding
ENSMUST00000173964 (Lats2-010) 57697227-57699890 protein_coding
ENSMUST00000173990 (Lats2-003) 57693544-57746105 protein_coding
ENSMUST00000174166 (Lats2-007) 57703051-57758388 protein_coding
ENSMUST00000174213 (Lats2-002) 57691098-57746121 nonsense_mediated_decay
ENSMUST00000174694 (Lats2-004) 57642077-57746103 nonsense_mediated_decay
ENSMUSG00000064525 (Gm26440)
predicted gene, 26440 		ENSMUST00000082591 (Gm26440-201) 57697809-57697937 snoRNA
ENSMUSG00000092358 (Gm20430)
predicted gene 20430 		ENSMUST00000172474 (Gm20430-001) 57698013-57698219 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003SR_0001ENSG00000150457ENST00000382592ENST00000472754ENSG00000150459ENST00000382533ENST00000450573ENST00000467636ENST00000471009ENST00000485646ENST00000492245ENST00000607003ENST00000621421ENSG00000180172ENST00000419579ENSG00000225585ENST00000422501ENSG00000233851ENST00000422510ENSG00000252128ENST00000516319CIL_0003SR_0002ENSMUSG00000021952ENSMUST00000089482ENSMUST00000172524ENSMUST00000172539ENSMUST00000172647ENSMUST00000173172ENSMUST00000173638ENSMUST00000173940ENSMUST00000174152ENSMUST00000174424ENSMUST00000174545ENSMUSG00000021959ENSMUST00000022531ENSMUST00000038381ENSMUST00000077981ENSMUST00000173077ENSMUST00000173732ENSMUST00000173964ENSMUST00000173990ENSMUST00000174166ENSMUST00000174213ENSMUST00000174694ENSMUSG00000064525ENSMUST00000082591ENSMUSG00000092358ENSMUST00000172474
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003SR_0001ENSG00000150457ENST00000382592ENSG00000150459ENST00000382533ENST00000450573ENST00000467636ENST00000492245ENST00000607003ENST00000621421ENSG00000180172ENST00000419579ENSG00000225585ENST00000422501ENSG00000233851ENST00000422510ENSG00000252128ENST00000516319CIL_0003SR_0002ENSMUSG00000021952ENSMUST00000089482ENSMUST00000174545ENSMUSG00000021959ENSMUST00000022531ENSMUST00000173990ENSMUST00000174213ENSMUST00000174694ENSMUSG00000064525ENSMUST00000082591ENSMUSG00000092358ENSMUST00000172474
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000150457 ENST00000382592 13.193±0.00 2.958±0.00 1.593±0.00 0.790±0.47 4.721±0.00 3.650±2.18 3.071±1.85 1.720±0.80 2.196±1.70 5.108±0.00 3.118±1.57 3.932±3.37 4.290±1.17 7.915±0.52
ENST00000472754 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000150459 ENST00000382533 N/A N/A 10.344±0.00 13.656±0.00 7.827±0.00 9.693±0.00 6.737±0.70 3.927±0.00 5.862±0.00 10.895±0.64 10.644±4.62 16.881±10.33 4.011±0.00 34.786±0.00
ENST00000450573 53.848±0.00 68.002±0.00 25.765±0.00 35.540±0.00 46.465±10.08 74.461±41.05 42.600±14.78 46.672±28.19 42.620±4.21 47.921±16.98 54.052±25.30 75.467±27.15 46.481±2.68 87.451±20.94
ENST00000467636 N/A N/A N/A 17.773±0.00 N/A N/A 13.534±0.00 N/A 9.510±0.00 9.676±0.00 N/A 15.993±0.00 28.364±0.00 N/A
ENST00000471009 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485646 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492245 N/A 45.768±0.00 N/A N/A N/A N/A 33.031±0.00 42.592±14.71 32.094±0.00 37.436±0.00 42.430±10.75 64.445±0.00 55.500±0.00 98.780±0.00
ENST00000607003 5.304±0.00 N/A N/A 10.261±0.00 4.529±0.00 N/A 9.333±0.00 N/A N/A N/A 5.237±0.00 12.485±3.02 12.092±2.41 N/A
ENST00000621421 N/A N/A N/A N/A N/A N/A N/A N/A 14.765±0.00 N/A N/A N/A N/A N/A
ENSG00000180172 ENST00000419579 0.035±0.00 0.213±0.00 N/A N/A 0.036±0.00 0.066±0.00 0.033±0.00 N/A N/A 0.033±0.00 N/A 0.520±0.44 0.263±0.00 0.066±0.00
ENSG00000225585 ENST00000422501 N/A 0.020±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.099±0.00
ENSG00000233851 ENST00000422510 N/A 0.024±0.00 N/A N/A 0.384±0.00 N/A 0.101±0.03 N/A N/A 0.258±0.00 N/A 0.051±0.02 N/A 0.055±0.01
ENSG00000252128 ENST00000516319 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.047±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021952 ENSMUST00000089482 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.546±0.00
ENSMUST00000172524 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172539 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173638 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173940 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174152 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174424 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174545 5.263±0.00 N/A 2.730±0.00 0.993±0.00 2.749±0.20 N/A 2.630±0.00 2.320±0.15 1.359±0.29 N/A N/A N/A 2.484±0.79 N/A
ENSMUSG00000021959 ENSMUST00000022531 14.154±1.27 24.088±7.55 15.959±0.57 3.947±0.70 16.936±6.18 11.152±3.95 8.130±0.55 15.762±3.17 3.356±0.75 45.644±6.79 3.644±0.51 25.131±8.75 8.362±4.16 20.080±8.58
ENSMUST00000038381 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000077981 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173732 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173964 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.478±0.00 N/A 3.281±0.00
ENSMUST00000174166 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174213 6.313±0.73 5.806±1.44 N/A N/A 5.964±0.22 6.626±1.35 N/A 6.374±1.52 1.118±0.00 9.021±0.00 N/A 10.062±4.15 N/A 28.494±3.39
ENSMUST00000174694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.351±0.27 N/A 5.953±0.00
ENSMUSG00000064525 ENSMUST00000082591 546.762±0.00 N/A N/A N/A N/A N/A N/A N/A 11.362±1.91 672.635±0.00 3.487±0.00 8.120±0.00 9.276±6.57 N/A
ENSMUSG00000092358 ENSMUST00000172474 2.969±0.28 N/A 2.212±0.20 0.283±0.00 N/A 3.156±0.00 2.872±0.00 2.077±0.76 1.688±2.00 2.676±0.48 0.614±0.12 3.300±0.93 4.838±3.24 1.345±0.03

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