C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 20430
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172474 Gm20430-001 ENSMUSG00000092358 10090 + 14:57698013-57698219 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000172474
Transcript ID Adipose Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000172474 2.969±0.28 2.212±0.20 0.283±0.00 3.156±0.00 2.872±0.00 2.077±0.76 1.688±2.00 2.676±0.48 0.614±0.12 3.300±0.93 4.838±3.24 1.345±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003SQ CIL_0003SQ_0002 CGP 14:57581002-57758388
CIL_0003SR CIL_0003SR_0002 CGP 14:57642077-57804980

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310055 RP11-344H11.4-001 unprocessed_pseudogene Homo_sapiens 0 202
ENST00000374520 RPL12P1-001 processed_pseudogene Homo_sapiens 0 231
ENST00000406185 RP11-480N24.3-001 processed_pseudogene Homo_sapiens 6e-36 152
ENST00000424565 RPL12P2-001 processed_pseudogene Homo_sapiens 0 248
ENST00000424633 RPL12L3-001 processed_pseudogene Homo_sapiens 0 243
ENST00000425565 RPL12P29-001 processed_pseudogene Homo_sapiens 0 209
ENST00000428087 RP11-248I9.2-001 processed_pseudogene Homo_sapiens 8e-26 121
ENST00000431782 RP11-169K16.6-001 processed_pseudogene Homo_sapiens 0 224
ENST00000432393 AC093698.2-001 processed_pseudogene Homo_sapiens 0 198
ENST00000432629 RPL12P4-001 processed_pseudogene Homo_sapiens 0 254
ENST00000439896 RPL12P1-001 processed_pseudogene Homo_sapiens 0 231
ENST00000448702 RPL12P1-001 processed_pseudogene Homo_sapiens 0 231
ENST00000467671 KIFC1-003 processed_transcript Homo_sapiens 9.80909e-45 183
ENST00000471280 RPL12P38-001 transcribed_processed_pseudogene Homo_sapiens 0 239
ENST00000472214 CTB-46B19.1-001 processed_pseudogene Homo_sapiens 0 220
ENST00000477007 RP11-106M3.1-001 processed_pseudogene Homo_sapiens 0 237
ENST00000481802 CTC-250I14.1-001 processed_pseudogene Homo_sapiens 0 231
ENST00000482081 RPL12P8-001 processed_pseudogene Homo_sapiens 0 200
ENST00000484010 RP11-428G5.2-001 processed_pseudogene Homo_sapiens 0 220
ENST00000485633 RPL12P33-001 processed_pseudogene Homo_sapiens 0 193
ENST00000486695 KIFC1-003 retained_intron Homo_sapiens 9.80909e-45 183
ENST00000486874 RPL12P37-001 processed_pseudogene Homo_sapiens 0 217
ENST00000492999 KIFC1-003 processed_transcript Homo_sapiens 9.80909e-45 183
ENST00000495231 RP11-434O22.1-001 processed_pseudogene Homo_sapiens 0 220
ENST00000588627 RPL12P38-002 processed_transcript Homo_sapiens 0 239
ENST00000603116 RP4-741O10.1-001 processed_pseudogene Homo_sapiens 2e-30 134

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