C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004JE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000138430-ENSG00000217236 CGP 9606 2:174072447-174338492
GeneTranscriptPositionBiotype
ENSG00000138430 (OLA1)
Obg-like ATPase 1 		ENST00000284719 (OLA1-001) 174072447-174248698 protein_coding
ENST00000344357 (OLA1-002) 174075008-174248599 protein_coding
ENST00000392560 (OLA1-008) 174075409-174124315 processed_transcript
ENST00000409546 (OLA1-003) 174075237-174248360 protein_coding
ENST00000427472 (OLA1-004) 174223057-174247287 protein_coding
ENST00000428402 (OLA1-009) 174075010-174248475 protein_coding
ENST00000429575 (OLA1-005) 174082010-174217946 protein_coding
ENST00000462000 (OLA1-006) 174080908-174123670 retained_intron
ENST00000497760 (OLA1-007) 174075190-174079351 retained_intron
ENSG00000217236 (SP9)
Sp9 transcription factor 		ENST00000394967 (SP9-001) 174334946-174338492 protein_coding
ENSG00000227180 (AC013467.1)
 ENST00000430717 (AC013467.1-001) 174299324-174300956 processed_pseudogene
ENSG00000231453 (LINC01305)
long intergenic non-protein coding RNA 1305 		ENST00000420866 (LINC01305-001) 174326027-174330643 lincRNA
ENST00000436820 (LINC01305-002) 174328772-174330542 lincRNA
ENSG00000237804 (HNRNPA1P39)
heterogeneous nuclear ribonucleoprotein A1 pseudogene 39 		ENST00000440547 (HNRNPA1P39-001) 174310015-174310974 processed_pseudogene
ENSG00000243770 (RN7SL65P)
RNA, 7SL, cytoplasmic 65, pseudogene 		ENST00000485221 (RN7SL65P-201) 174240143-174240457 misc_RNA
ENSG00000270799 (RP11-451F14.1)
 ENST00000605472 (RP11-451F14.1-001) 174171891-174172725 processed_pseudogene
ENSG00000280414 (RP11-572N21.1)
 ENST00000624790 (RP11-572N21.1-001) 174334438-174337566 TEC

Homo sapiens Ensembl (GRCh38)

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CIL_0004JE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027108-ENSMUSG00000068859 CGP 10090 2:73092801-73284706
GeneTranscriptPositionBiotype
ENSMUSG00000027108 (Ola1)
Obg-like ATPase 1 		ENSMUST00000028517 (Ola1-001) 73092801-73214447 protein_coding
ENSMUST00000100015 (Ola1-002) 73137527-73214333 protein_coding
ENSMUST00000112055 (Ola1-005) 73093202-73212960 protein_coding
ENSMUST00000133228 (Ola1-006) 73212871-73218924 processed_transcript
ENSMUST00000136684 (Ola1-003) 73198601-73214412 processed_transcript
ENSMUST00000152608 (Ola1-004) 73093200-73214426 processed_transcript
ENSMUSG00000041777 (Cir1)
corepressor interacting with RBPJ, 1 		ENSMUST00000058615 (Cir1-001) 73283105-73312701 protein_coding
ENSMUST00000136519 (Cir1-002) 73305919-73312566 processed_transcript
ENSMUSG00000068859 (Sp9)
trans-acting transcription factor 9 		ENSMUST00000090813 (Sp9-001) 73271925-73277471 protein_coding
ENSMUST00000147133 (Sp9-002) 73271966-73284706 processed_transcript
ENSMUSG00000082455 (Gm13665)
predicted gene 13665 		ENSMUST00000120830 (Gm13665-001) 73116748-73117275 processed_pseudogene
ENSMUSG00000083569 (Gm13666)
predicted gene 13666 		ENSMUST00000120032 (Gm13666-001) 73131745-73132543 processed_pseudogene
ENSMUSG00000083976 (Gm13664)
predicted gene 13664 		ENSMUST00000117304 (Gm13664-001) 73176611-73176955 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

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Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004JE_0001ENSG00000138430ENST00000284719ENST00000344357ENST00000392560ENST00000409546ENST00000427472ENST00000428402ENST00000429575ENST00000462000ENST00000497760ENSG00000217236ENST00000394967ENSG00000227180ENST00000430717ENSG00000231453ENST00000420866ENST00000436820ENSG00000237804ENST00000440547ENSG00000243770ENST00000485221ENSG00000270799ENST00000605472ENSG00000280414ENST00000624790CIL_0004JE_0002ENSMUSG00000027108ENSMUST00000028517ENSMUST00000100015ENSMUST00000112055ENSMUST00000133228ENSMUST00000136684ENSMUST00000152608ENSMUSG00000041777ENSMUST00000058615ENSMUST00000136519ENSMUSG00000068859ENSMUST00000090813ENSMUST00000147133ENSMUSG00000082455ENSMUST00000120830ENSMUSG00000083569ENSMUST00000120032ENSMUSG00000083976ENSMUST00000117304
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004JE_0001ENSG00000138430ENST00000284719ENST00000344357ENST00000428402ENST00000429575ENSG00000217236ENST00000394967ENSG00000227180ENST00000430717ENSG00000231453ENST00000420866ENST00000436820ENSG00000237804ENST00000440547ENSG00000243770ENST00000485221ENSG00000270799ENST00000605472ENSG00000280414ENST00000624790CIL_0004JE_0002ENSMUSG00000027108ENSMUST00000028517ENSMUST00000100015ENSMUST00000112055ENSMUST00000136684ENSMUST00000152608ENSMUSG00000041777ENSMUST00000058615ENSMUST00000136519ENSMUSG00000068859ENSMUST00000090813ENSMUSG00000082455ENSMUST00000120830ENSMUSG00000083569ENSMUST00000120032ENSMUSG00000083976ENSMUST00000117304
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138430 ENST00000284719 N/A N/A 0.490±0.00 4.537±0.17 0.897±0.00 0.764±0.00 0.397±0.00 N/A 1.016±0.00 0.976±0.00 1.477±0.00 1.584±0.57 N/A N/A
ENST00000344357 18.761±0.00 19.668±0.00 2.833±0.00 25.480±4.30 14.340±7.64 16.697±8.93 9.388±5.38 15.540±10.16 9.247±1.67 6.630±3.44 16.988±12.08 29.255±19.25 22.451±2.91 25.795±4.24
ENST00000392560 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409546 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000427472 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000428402 N/A N/A N/A N/A N/A N/A 3.054±0.00 N/A N/A 3.135±0.00 5.266±0.00 6.010±0.00 6.375±1.91 N/A
ENST00000429575 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 70.572±0.00 23.453±0.00 30.148±0.00
ENST00000462000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497760 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000217236 ENST00000394967 N/A N/A N/A 0.930±0.41 0.092±0.00 N/A N/A N/A N/A N/A 0.176±0.00 0.208±0.18 0.043±0.02 0.619±0.13
ENSG00000227180 ENST00000430717 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.017±0.01
ENSG00000231453 ENST00000420866 0.016±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.025±0.02 0.037±0.01 0.033±0.01
ENST00000436820 N/A 0.037±0.00 N/A N/A 0.037±0.00 N/A N/A N/A N/A N/A N/A N/A 0.047±0.02 0.070±0.04
ENSG00000237804 ENST00000440547 0.015±0.00 0.047±0.00 N/A N/A N/A N/A N/A 0.016±0.00 N/A 0.016±0.00 0.041±0.00 N/A 0.019±0.00 0.046±0.03
ENSG00000243770 ENST00000485221 N/A 0.203±0.00 N/A N/A 1.125±0.00 N/A N/A N/A N/A 0.303±0.00 N/A 2.765±0.00 N/A N/A
ENSG00000270799 ENST00000605472 N/A 0.162±0.00 N/A N/A 0.046±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000280414 ENST00000624790 N/A N/A N/A N/A N/A 0.010±0.00 N/A N/A N/A N/A N/A N/A N/A 0.215±0.09
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027108 ENSMUST00000028517 3.537±0.41 2.361±0.89 5.731±0.30 9.453±2.67 2.458±0.68 2.324±0.39 3.786±0.65 2.962±0.53 5.143±3.87 2.282±0.24 5.942±1.06 2.306±2.27 7.345±3.06 4.544±0.39
ENSMUST00000100015 4.278±0.00 N/A N/A 49.742±0.00 N/A 1.119±0.00 2.881±0.00 N/A 10.732±1.13 N/A N/A 16.564±21.28 38.578±34.25 16.218±0.00
ENSMUST00000112055 4.650±1.51 2.033±0.72 N/A N/A 4.759±0.27 4.010±1.55 1.777±0.57 2.242±1.12 3.910±1.08 3.253±1.03 N/A 3.865±1.04 N/A 2.093±0.16
ENSMUST00000133228 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136684 N/A 1.273±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152608 1.700±0.41 N/A N/A 18.223±9.07 1.900±0.20 N/A 1.437±0.44 1.709±0.54 5.990±2.66 N/A 5.092±1.84 7.988±5.92 16.671±11.72 10.187±0.00
ENSMUSG00000041777 ENSMUST00000058615 2.474±0.26 1.148±0.00 8.835±0.31 6.740±2.84 1.808±0.60 1.135±0.24 1.889±0.33 2.976±0.50 9.559±5.59 2.908±0.62 4.527±0.40 2.950±3.20 4.487±1.55 11.326±4.61
ENSMUST00000136519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.047±0.00 7.043±0.00 72.848±0.00
ENSMUSG00000068859 ENSMUST00000090813 N/A N/A N/A 7.506±1.61 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147133 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000082455 ENSMUST00000120830 0.131±0.00 0.675±0.00 0.111±0.00 N/A 0.164±0.00 N/A 0.205±0.00 N/A 0.069±0.01 N/A N/A N/A 0.219±0.00 0.117±0.00
ENSMUSG00000083569 ENSMUST00000120032 0.092±0.05 N/A N/A 0.169±0.00 0.160±0.09 0.169±0.06 0.042±0.00 0.097±0.05 0.087±0.05 0.137±0.07 0.084±0.00 0.431±0.00 N/A 0.046±0.00
ENSMUSG00000083976 ENSMUST00000117304 0.248±0.00 N/A 0.041±0.00 N/A 0.581±0.23 0.569±0.02 N/A N/A 0.140±0.14 N/A N/A 1.444±0.00 N/A N/A

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