C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 10540
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000097581 Gm10540-201 ENSMUSG00000073569 10090 - 18:45285833-45286108 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartLiverOvaryPlacentaTestisENSMUST00000097581
Transcript ID Bladder Brain Heart Liver Ovary Placenta Testis
ENSMUST00000097581 0.316±0.17 0.426±0.22 0.571±0.16 0.079±0.02 1.344±0.65 2.648±1.43 0.224±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004UP CIL_0004UP_0002 CGP 18:44828665-45686024
CIL_0004UO CIL_0004UO_0002 CGP 18:45268860-46212607

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314523 SUMO2-002 protein_coding Homo_sapiens 0 222
ENST00000326669 SUMO4-001 protein_coding Homo_sapiens 0 318
ENST00000404494 RP3-509I19.6-001 transcribed_processed_pseudogene Homo_sapiens 0 217
ENST00000414746 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 375
ENST00000415468 AC079809.2-001 processed_pseudogene Homo_sapiens 0 267
ENST00000417139 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 375
ENST00000418008 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 375
ENST00000420826 SUMO2-001 protein_coding Homo_sapiens 0 401
ENST00000428065 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 375
ENST00000434672 SUMO2P8-001 processed_pseudogene Homo_sapiens 0 311
ENST00000436431 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 375
ENST00000438311 SUMO2P3-001 processed_pseudogene Homo_sapiens 0 346
ENST00000443604 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 375
ENST00000445436 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 375
ENST00000452006 SUMO2P10-001 processed_pseudogene Homo_sapiens 0 305
ENST00000455040 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 375
ENST00000456482 SUMO2P2-001 processed_pseudogene Homo_sapiens 0.0000000000002 79
ENST00000504193 SUMO2P4-002 processed_pseudogene Homo_sapiens 0 311
ENST00000504438 SUMO2P17-001 transcribed_processed_pseudogene Homo_sapiens 0 337
ENST00000505273 SUMO2P6-001 processed_pseudogene Homo_sapiens 0 357
ENST00000506790 SUMO2P5-001 processed_pseudogene Homo_sapiens 6e-39 163
ENST00000518873 SUMO2P18-001 processed_pseudogene Homo_sapiens 0.000001 57
ENST00000520803 SUMO2P20-001 processed_pseudogene Homo_sapiens 0 307
ENST00000536192 RP1-241P17.4-001 processed_pseudogene Homo_sapiens 0 396
ENST00000572284 RP3-509I19.6-002 processed_transcript Homo_sapiens 0 217
ENST00000578238 SUMO2-003 protein_coding Homo_sapiens 0 392

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