C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000619270 CTD-2062A1.2-001 ENSG00000275506 9606 - 5:139612002-139612363 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverOvaryENST00000619270
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Ovary
ENST00000619270 0.070±0.00 0.289±0.00 0.812±0.00 0.181±0.00 0.283±0.00 0.032±0.00 0.105±0.00 0.121±0.00 0.092±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000548 CIL_000548_0001 CGP 5:139475534-139628433
CIL_000549 CIL_000549_0001 CGP 5:139526431-139683882

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000120752 Gm3835-001 processed_pseudogene Mus_musculus 0 278
ENSMUST00000119459 H3f3c-001 processed_pseudogene Mus_musculus 0 278
ENSMUST00000171334 Gm4938-201 processed_pseudogene Mus_musculus 0 278
ENSMUST00000119546 H3f3a-ps1-001 processed_pseudogene Mus_musculus 0 274
ENSMUST00000162814 H3f3a-003 protein_coding Mus_musculus 0 272
ENSMUST00000161308 H3f3a-001 protein_coding Mus_musculus 0 272
ENSMUST00000179671 Gm10257-201 processed_pseudogene Mus_musculus 0 263
ENSMUST00000169993 Gm17136-001 processed_pseudogene Mus_musculus 0 261
ENSMUST00000179566 Gm6132-201 processed_pseudogene Mus_musculus 0 255
ENSMUST00000159789 H3f3a-007 protein_coding Mus_musculus 0 228
ENSMUST00000186232 RP23-128A11.4-001 processed_pseudogene Mus_musculus 1.99993e-41 172
ENSMUST00000174739 Gm20545-001 processed_pseudogene Mus_musculus 1e-27 126

Loading