C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005TX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000153246-ENSG00000115221 CGP 9606 2:159932006-160271888
GeneTranscriptPositionBiotype
ENSG00000115221 (ITGB6)
integrin, beta 6 		ENST00000283249 (ITGB6-001) 160099666-160200301 protein_coding
ENST00000409583 (ITGB6-002) 160099671-160200304 nonsense_mediated_decay
ENST00000409872 (ITGB6-007) 160101736-160200304 protein_coding
ENST00000409967 (ITGB6-004) 160101685-160200258 protein_coding
ENST00000428609 (ITGB6-006) 160101636-160200252 protein_coding
ENST00000459712 (ITGB6-009) 160257718-160271880 processed_transcript
ENST00000475438 (ITGB6-003) 160101565-160112110 processed_transcript
ENST00000477514 (ITGB6-010) 160257840-160271249 processed_transcript
ENST00000485635 (ITGB6-005) 160141981-160271888 processed_transcript
ENST00000498478 (ITGB6-008) 160200773-160253849 processed_transcript
ENST00000620391 (ITGB6-201) 160099667-160200313 protein_coding
ENSG00000153246 (PLA2R1)
phospholipase A2 receptor 1, 180kDa 		ENST00000283243 (PLA2R1-001) 159937851-160062610 protein_coding
ENST00000392771 (PLA2R1-002) 159945815-160062610 protein_coding
ENST00000460710 (PLA2R1-003) 159932006-159945000 processed_transcript
CIL_0005TX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000054580-ENSMUSG00000026971 CGP 10090 2:60417543-60722643
GeneTranscriptPositionBiotype
ENSMUSG00000026971 (Itgb6)
integrin beta 6 		ENSMUST00000028348 (Itgb6-001) 60600231-60722643 protein_coding
ENSMUST00000059888 (Itgb6-002) 60598292-60673711 protein_coding
ENSMUST00000112517 (Itgb6-003) 60604245-60722643 protein_coding
ENSMUST00000133887 (Itgb6-006) 60634431-60673693 processed_transcript
ENSMUST00000142696 (Itgb6-009) 60693445-60705578 processed_transcript
ENSMUST00000145009 (Itgb6-005) 60669248-60673703 processed_transcript
ENSMUST00000147906 (Itgb6-008) 60674644-60705601 processed_transcript
ENSMUST00000151035 (Itgb6-007) 60653048-60673754 processed_transcript
ENSMUST00000154764 (Itgb6-004) 60605139-60673726 protein_coding
ENSMUSG00000054580 (Pla2r1)
phospholipase A2 receptor 1 		ENSMUST00000067708 (Pla2r1-201) 60417543-60553308 protein_coding
ENSMUST00000112525 (Pla2r1-001) 60417543-60553308 protein_coding
ENSMUST00000126327 (Pla2r1-006) 60420025-60424307 processed_transcript
ENSMUST00000128208 (Pla2r1-002) 60451109-60553308 processed_transcript
ENSMUST00000134583 (Pla2r1-005) 60451992-60455254 processed_transcript
ENSMUST00000136034 (Pla2r1-004) 60440890-60443424 processed_transcript
ENSMUST00000150373 (Pla2r1-003) 60533878-60553308 processed_transcript
ENSMUSG00000083195 (Gm13567)
predicted gene 13567 		ENSMUST00000118026 (Gm13567-001) 60596048-60596294 processed_pseudogene
ENSMUSG00000084115 (Gm13566)
predicted gene 13566 		ENSMUST00000117428 (Gm13566-001) 60577537-60578678 processed_pseudogene
ENSMUSG00000086578 (Gm13583)
predicted gene 13583 		ENSMUST00000126361 (Gm13583-002) 60552355-60553274 antisense
ENSMUST00000151931 (Gm13583-001) 60550757-60553923 antisense
ENSMUST00000168789 (Gm13583-201) 60550759-60550881 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005TX_0001ENSG00000115221ENST00000283249ENST00000409583ENST00000409872ENST00000409967ENST00000428609ENST00000459712ENST00000475438ENST00000477514ENST00000485635ENST00000498478ENST00000620391ENSG00000153246ENST00000283243ENST00000392771ENST00000460710CIL_0005TX_0002ENSMUSG00000026971ENSMUST00000028348ENSMUST00000059888ENSMUST00000112517ENSMUST00000133887ENSMUST00000142696ENSMUST00000145009ENSMUST00000147906ENSMUST00000151035ENSMUST00000154764ENSMUSG00000054580ENSMUST00000067708ENSMUST00000112525ENSMUST00000126327ENSMUST00000128208ENSMUST00000134583ENSMUST00000136034ENSMUST00000150373ENSMUSG00000083195ENSMUST00000118026ENSMUSG00000084115ENSMUST00000117428ENSMUSG00000086578ENSMUST00000126361ENSMUST00000151931ENSMUST00000168789
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005TX_0001ENSG00000115221ENST00000283249ENST00000409583ENST00000409872ENST00000409967ENST00000428609ENST00000459712ENST00000477514ENST00000498478ENST00000620391ENSG00000153246ENST00000283243ENST00000392771ENST00000460710CIL_0005TX_0002ENSMUSG00000026971ENSMUST00000028348ENSMUST00000059888ENSMUST00000133887ENSMUST00000154764ENSMUSG00000054580ENSMUST00000067708ENSMUST00000128208ENSMUSG00000083195ENSMUST00000118026ENSMUSG00000084115ENSMUST00000117428ENSMUSG00000086578ENSMUST00000126361ENSMUST00000151931
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115221 ENST00000283249 N/A N/A 1.214±0.00 N/A N/A N/A 0.217±0.18 7.481±0.00 N/A 1.569±0.54 0.945±0.00 0.137±0.04 3.261±1.91 N/A
ENST00000409583 N/A N/A N/A N/A 1.110±0.00 0.692±0.00 0.199±0.00 13.281±0.00 0.495±0.00 1.449±0.00 N/A 0.688±0.56 1.591±0.00 0.185±0.00
ENST00000409872 N/A N/A 0.812±0.00 N/A N/A N/A 0.087±0.00 N/A 0.842±0.00 N/A 2.469±2.27 1.996±0.00 N/A N/A
ENST00000409967 N/A N/A N/A N/A N/A 0.578±0.00 0.153±0.00 N/A 0.006±0.00 N/A N/A N/A N/A N/A
ENST00000428609 N/A N/A N/A N/A 0.895±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000459712 0.433±0.00 0.120±0.00 N/A 0.907±0.00 N/A N/A 1.696±0.00 N/A N/A N/A 1.479±0.00 N/A N/A 17.652±2.82
ENST00000475438 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477514 0.749±0.00 N/A N/A 0.468±0.00 N/A N/A 4.080±0.00 0.910±0.00 N/A N/A 1.382±0.00 N/A N/A N/A
ENST00000485635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498478 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.782±0.00 N/A N/A N/A
ENST00000620391 N/A N/A N/A N/A N/A N/A N/A 0.022±0.00 0.003±0.00 2.413±0.00 N/A 1.153±1.20 1.769±0.00 N/A
ENSG00000153246 ENST00000283243 0.663±0.00 0.615±0.00 2.501±0.00 0.152±0.03 1.406±0.28 0.501±0.00 0.104±0.05 3.753±0.00 0.066±0.00 0.446±0.15 0.065±0.03 0.659±0.11 0.284±0.06 0.410±0.25
ENST00000392771 0.511±0.00 0.324±0.00 1.357±0.00 0.075±0.01 0.812±0.10 0.710±0.09 0.172±0.04 3.505±0.00 2.358±0.00 0.493±0.28 0.151±0.00 1.256±0.63 0.569±0.35 0.305±0.21
ENST00000460710 N/A N/A N/A N/A N/A N/A N/A 0.939±0.00 N/A N/A N/A 4.849±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026971 ENSMUST00000028348 0.410±0.00 N/A N/A N/A 0.542±0.29 N/A 1.511±0.27 N/A 0.014±0.00 N/A N/A N/A N/A N/A
ENSMUST00000059888 0.014±0.00 0.026±0.00 1.218±0.28 0.012±0.00 0.267±0.07 1.578±0.61 N/A 2.701±0.24 0.009±0.01 2.720±0.97 N/A 0.361±0.20 0.286±0.13 0.017±0.00
ENSMUST00000112517 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133887 N/A N/A N/A N/A N/A N/A N/A N/A 0.014±0.00 N/A N/A N/A N/A N/A
ENSMUST00000142696 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145009 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147906 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154764 N/A N/A N/A 0.040±0.00 0.618±0.31 3.485±1.89 1.609±0.00 8.167±3.80 0.031±0.00 7.223±0.43 N/A 0.753±0.37 0.665±0.00 0.013±0.00
ENSMUSG00000054580 ENSMUST00000067708 1.361±0.45 0.328±0.12 9.477±1.80 0.086±0.01 0.727±0.26 0.669±0.24 0.212±0.07 1.266±0.20 0.153±0.09 1.653±0.59 0.308±0.10 1.639±0.86 1.136±0.37 0.284±0.12
ENSMUST00000112525 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126327 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128208 N/A 0.218±0.00 N/A 0.109±0.07 0.516±0.04 N/A 0.231±0.01 N/A 0.123±0.03 N/A 0.180±0.00 0.918±0.33 N/A N/A
ENSMUST00000134583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136034 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150373 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000083195 ENSMUST00000118026 N/A N/A N/A N/A N/A N/A N/A 0.398±0.01 N/A N/A N/A N/A N/A N/A
ENSMUSG00000084115 ENSMUST00000117428 N/A N/A 0.018±0.00 N/A N/A N/A 0.049±0.02 0.108±0.01 N/A N/A 0.050±0.03 N/A N/A N/A
ENSMUSG00000086578 ENSMUST00000126361 3.484±0.84 0.840±0.31 N/A N/A 2.468±0.61 2.408±0.69 1.238±0.10 3.616±0.83 0.426±0.08 7.040±1.24 N/A 3.214±0.99 N/A 0.639±0.12
ENSMUST00000151931 2.548±0.64 0.303±0.14 N/A N/A 0.886±0.18 0.616±0.00 0.451±0.00 N/A 0.274±0.03 3.140±0.65 N/A 2.421±0.93 N/A 0.300±0.09
ENSMUST00000168789 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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