C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11462
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117749 Gm11462-001 ENSMUSG00000082924 10090 + 2:165959789-165960350 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLiverPlacentaTestisENSMUST00000117749
Transcript ID Breast Liver Placenta Testis
ENSMUST00000117749 0.095±0.00 0.034±0.00 0.081±0.00 0.076±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NW CIL_0008NW_0002 VISTA 2:165614396-166214787
CIL_0006IW CIL_0006IW_0003 CGP 2:165784152-166073242

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295955 RPL9-001 protein_coding Homo_sapiens 0 521
ENST00000330965 RPL9P7-001 processed_pseudogene Homo_sapiens 0 521
ENST00000393394 RPL9-201 protein_coding Homo_sapiens 0 527
ENST00000418824 UBE2Q2P6-002 processed_transcript Homo_sapiens 0 464
ENST00000423843 AC093698.1-001 processed_pseudogene Homo_sapiens 0 399
ENST00000424673 RPL9P2-001 processed_pseudogene Homo_sapiens 0 353
ENST00000437992 RPL9-010 retained_intron Homo_sapiens 0 401
ENST00000449470 RPL9-002 protein_coding Homo_sapiens 0 521
ENST00000461606 RPL9P28-001 processed_pseudogene Homo_sapiens 0 416
ENST00000463864 CTD-2290C23.1-001 processed_pseudogene Homo_sapiens 0 472
ENST00000464118 RPL9P32-001 processed_pseudogene Homo_sapiens 0 431
ENST00000466501 UBE2Q2P6-001 transcribed_processed_pseudogene Homo_sapiens 0 527
ENST00000475906 RPL9P3-001 processed_pseudogene Homo_sapiens 0 453
ENST00000489563 RPL9P25-001 processed_pseudogene Homo_sapiens 0 464
ENST00000491923 RPL9P16-001 processed_pseudogene Homo_sapiens 0 263
ENST00000495117 RPL9P31-001 processed_pseudogene Homo_sapiens 0 287
ENST00000503040 RPL9-011 protein_coding Homo_sapiens 0 459
ENST00000503277 RPL9-008 retained_intron Homo_sapiens 0 460
ENST00000504470 RPL9-009 protein_coding Homo_sapiens 0 501
ENST00000506581 RPL9-012 protein_coding Homo_sapiens 4e-23 111
ENST00000508595 RPL9-007 protein_coding Homo_sapiens 0 460
ENST00000511075 RPL9-006 retained_intron Homo_sapiens 0 462
ENST00000511084 CTB-85P21.1-001 processed_pseudogene Homo_sapiens 0 217
ENST00000514842 RPL9-005 retained_intron Homo_sapiens 0 302
ENST00000561773 TIPIN-006 processed_transcript Homo_sapiens 0 464

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