C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000760_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000112874-ENSG00000184349 CGP 9606 5:103548855-107670895
GeneTranscriptPositionBiotype
ENSG00000112874 (NUDT12)
nudix (nucleoside diphosphate linked moiety X)-type motif 12 		ENST00000230792 (NUDT12-001) 103548855-103562793 protein_coding
ENST00000507423 (NUDT12-002) 103550508-103562789 protein_coding
ENST00000508889 (NUDT12-003) 103559405-103562790 retained_intron
ENST00000515407 (NUDT12-004) 103554502-103556089 processed_transcript
ENSG00000184349 (EFNA5)
ephrin-A5 		ENST00000333274 (EFNA5-001) 107376889-107670895 protein_coding
ENST00000504941 (EFNA5-002) 107426976-107670885 retained_intron
ENST00000505499 (EFNA5-005) 107427217-107506191 processed_transcript
ENST00000509503 (EFNA5-003) 107381238-107670627 protein_coding
ENST00000510359 (EFNA5-004) 107380984-107388553 processed_transcript
ENST00000611503 (EFNA5-201) 107376889-107427514 protein_coding
ENSG00000239808 (RN7SL255P)
RNA, 7SL, cytoplasmic 255, pseudogene 		ENST00000470639 (RN7SL255P-201) 104260531-104260826 misc_RNA
ENSG00000250145 (CTD-2285G11.1)
 ENST00000512162 (CTD-2285G11.1-001) 106543066-106544330 processed_pseudogene
ENSG00000250273 (PSMC1P5)
proteasome (prosome, macropain) 26S subunit, ATPase, 1 pseudogene 5 		ENST00000512850 (PSMC1P5-001) 107195156-107195332 processed_pseudogene
ENSG00000251026 (RP11-138J23.1)
 ENST00000514769 (RP11-138J23.1-001) 104079911-104105403 lincRNA
ENSG00000251027 (CTC-254B4.1)
 ENST00000505997 (CTC-254B4.1-002) 106815205-106980869 lincRNA
ENST00000513273 (CTC-254B4.1-001) 106815197-107011014 lincRNA
ENSG00000251204 (CTC-278L1.1)
 ENST00000509159 (CTC-278L1.1-001) 106415576-106417241 processed_pseudogene
ENSG00000251574 (RP11-6N13.1)
 ENST00000503650 (RP11-6N13.1-007) 104484204-105392970 lincRNA
ENST00000505824 (RP11-6N13.1-002) 104630536-104773791 lincRNA
ENST00000506976 (RP11-6N13.1-001) 104630387-104773822 lincRNA
ENST00000518276 (RP11-6N13.1-005) 104743692-104773660 lincRNA
ENST00000522838 (RP11-6N13.1-003) 104763231-104773784 lincRNA
ENST00000523434 (RP11-6N13.1-004) 104739254-104773696 lincRNA
ENST00000524083 (RP11-6N13.1-009) 104736761-104739541 lincRNA
ENST00000524159 (RP11-6N13.1-006) 104739261-104746609 lincRNA
ENST00000524336 (RP11-6N13.1-008) 104383298-104910733 lincRNA
ENSG00000253584 (CTD-2374C24.1)
 ENST00000517758 (CTD-2374C24.1-001) 104917492-105008917 lincRNA
ENST00000522464 (CTD-2374C24.1-002) 104973287-105246364 lincRNA
ENSG00000253776 (RP11-6N13.4)
 ENST00000523745 (RP11-6N13.4-001) 104773641-104799772 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_000760_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024228-ENSMUSG00000048915 CGP 10090 17:58999618-62881317
GeneTranscriptPositionBiotype
ENSMUSG00000024228 (Nudt12)
nudix (nucleoside diphosphate linked moiety X)-type motif 12 		ENSMUST00000025065 (Nudt12-001) 58999618-59013372 protein_coding
ENSMUST00000174108 (Nudt12-003) 59000111-59003707 retained_intron
ENSMUST00000174122 (Nudt12-002) 59006395-59013268 protein_coding
ENSMUSG00000048915 (Efna5)
ephrin A5 		ENSMUST00000076840 (Efna5-001) 62604184-62881317 protein_coding
ENSMUST00000078839 (Efna5-002) 62607319-62881144 protein_coding
ENSMUSG00000086594 (Nudt12os)
nudix (nucleoside diphosphate linked moiety X)-type motif 12, opposite strand 		ENSMUST00000145848 (Nudt12os-002) 58996251-59012138 antisense
ENSMUST00000152750 (Nudt12os-001) 58996275-59024981 antisense
ENSMUST00000167453 (Nudt12os-201) 59017314-59024729 antisense
ENSMUSG00000093761 (Gm5496)
predicted gene 5496 		ENSMUST00000176658 (Gm5496-001) 61360573-61361614 processed_pseudogene
ENSMUSG00000098123 (Gm4518)
predicted gene 4518 		ENSMUST00000182638 (Gm4518-001) 61780915-61781632 processed_pseudogene
ENSMUSG00000098156 (Gm27023)
predicted gene, 27023 		ENSMUST00000182372 (Gm27023-001) 61781683-61781967 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000760_0001ENSG00000112874ENST00000230792ENST00000507423ENSG00000184349ENST00000333274ENST00000504941ENST00000510359ENST00000611503ENSG00000239808ENST00000470639ENSG00000250145ENST00000512162ENSG00000250273ENST00000512850ENSG00000251026ENST00000514769ENSG00000251027ENST00000505997ENST00000513273ENSG00000251204ENST00000509159ENSG00000251574ENST00000503650ENST00000506976ENST00000518276ENST00000522838ENST00000523434ENST00000524083ENST00000524159ENST00000524336ENSG00000253584ENST00000517758ENST00000522464ENSG00000253776ENST00000523745CIL_000760_0002ENSMUSG00000024228ENSMUST00000025065ENSMUST00000174108ENSMUST00000174122ENSMUSG00000048915ENSMUST00000076840ENSMUST00000078839ENSMUSG00000086594ENSMUST00000145848ENSMUST00000152750ENSMUST00000167453ENSMUSG00000093761ENSMUST00000176658ENSMUSG00000098123ENSMUST00000182638ENSMUSG00000098156ENSMUST00000182372
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000112874 ENST00000230792 0.775±0.00 0.900±0.00 2.731±0.00 2.987±0.73 1.551±0.22 1.594±0.20 1.497±0.98 3.875±1.45 3.369±0.00 N/A 0.212±0.00 1.104±0.49 0.701±0.18 1.562±0.00
ENST00000507423 0.416±0.00 N/A N/A 1.073±0.00 0.843±0.24 N/A 0.618±0.20 1.978±0.00 0.639±0.00 0.933±0.00 0.982±0.00 1.226±0.69 1.526±0.00 1.634±0.83
ENST00000508889 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515407 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000184349 ENST00000333274 0.430±0.00 0.263±0.00 N/A 1.228±0.27 2.105±1.21 0.539±0.07 N/A 1.984±0.00 0.141±0.00 0.224±0.00 N/A 1.094±0.63 2.622±0.00 0.847±0.18
ENST00000504941 N/A N/A 2.162±0.00 N/A 2.991±0.00 2.340±0.00 N/A N/A 0.982±0.00 0.750±0.00 N/A N/A N/A N/A
ENST00000505499 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510359 N/A N/A N/A N/A N/A N/A N/A N/A 1.457±0.00 N/A N/A N/A N/A 1.190±0.00
ENST00000611503 N/A 0.236±0.00 N/A N/A N/A N/A N/A N/A N/A 0.563±0.00 0.024±0.00 0.801±0.00 0.957±0.00 0.156±0.00
ENSG00000239808 ENST00000470639 N/A 0.740±0.00 N/A N/A 0.059±0.00 N/A N/A N/A N/A N/A N/A N/A 0.120±0.00 0.258±0.00
ENSG00000250145 ENST00000512162 N/A N/A N/A N/A N/A N/A N/A N/A 0.029±0.00 N/A N/A N/A N/A N/A
ENSG00000250273 ENST00000512850 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.235±0.00 0.468±0.00 0.700±0.00
ENSG00000251026 ENST00000514769 N/A 0.047±0.00 N/A 0.024±0.00 N/A N/A 0.022±0.00 0.093±0.00 N/A N/A N/A 0.262±0.00 0.119±0.05 0.045±0.02
ENSG00000251027 ENST00000505997 N/A 0.041±0.00 N/A 0.339±0.00 0.100±0.00 N/A 0.020±0.00 0.061±0.00 N/A N/A 0.019±0.00 N/A N/A 0.324±0.00
ENST00000513273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.029±0.00 1.203±0.69
ENSG00000251204 ENST00000509159 N/A N/A N/A 0.029±0.00 N/A N/A N/A N/A N/A 0.007±0.00 0.092±0.00 N/A N/A 0.008±0.00
ENSG00000251574 ENST00000503650 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.088±0.02 0.197±0.02
ENST00000505824 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506976 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.277±0.00
ENST00000518276 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.087±0.00 0.480±0.22
ENST00000522838 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.255±0.00
ENST00000523434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.176±0.00
ENST00000524083 0.066±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524159 N/A N/A N/A 0.030±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524336 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.099±0.00
ENSG00000253584 ENST00000517758 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.253±0.18 0.300±0.00
ENST00000522464 0.036±0.00 N/A N/A 0.020±0.00 N/A 0.069±0.00 N/A 0.092±0.00 N/A N/A N/A 0.333±0.00 0.123±0.06 0.330±0.12
ENSG00000253776 ENST00000523745 N/A N/A N/A N/A 0.637±0.00 N/A N/A N/A N/A N/A N/A N/A 0.081±0.00 0.435±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024228 ENSMUST00000025065 1.144±0.20 0.684±0.17 0.697±0.00 0.271±0.16 0.754±0.26 0.735±0.33 0.889±0.14 1.743±0.70 2.346±1.57 0.704±0.33 0.756±0.16 0.336±0.25 0.236±0.08 0.379±0.18
ENSMUST00000174108 3.180±1.19 7.402±0.44 1.470±0.00 0.610±0.09 4.116±1.31 1.186±0.40 1.609±0.15 5.644±1.03 7.101±5.63 1.333±0.10 0.557±0.09 1.431±0.45 0.443±0.04 0.704±0.10
ENSMUST00000174122 1.858±0.39 N/A 1.382±0.13 0.353±0.00 3.146±0.55 1.236±0.00 1.601±0.26 3.014±1.21 3.200±1.85 0.733±0.00 0.725±0.13 1.383±1.05 0.822±0.36 0.893±0.17
ENSMUSG00000048915 ENSMUST00000076840 0.924±0.15 1.716±0.28 N/A 4.121±3.12 1.686±0.00 0.485±0.13 N/A 0.586±0.23 0.403±0.22 0.516±0.13 0.046±0.02 1.249±0.50 0.325±0.24 0.115±0.09
ENSMUST00000078839 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.178±0.00 N/A 0.556±0.00 0.552±0.28
ENSMUSG00000086594 ENSMUST00000145848 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.342±0.54
ENSMUST00000152750 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.325±1.45
ENSMUST00000167453 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.888±0.00
ENSMUSG00000093761 ENSMUST00000176658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.073±0.00 N/A
ENSMUSG00000098123 ENSMUST00000182638 0.479±0.38 0.239±0.08 1.929±1.50 0.553±0.66 0.781±0.57 0.162±0.05 0.476±0.35 0.292±0.23 0.590±0.79 0.055±0.01 0.468±0.15 0.182±0.09 0.149±0.04 0.064±0.02
ENSMUSG00000098156 ENSMUST00000182372 0.338±0.00 N/A 0.125±0.03 N/A N/A N/A 0.288±0.03 0.277±0.03 0.038±0.00 N/A 0.610±0.21 0.525±0.00 0.223±0.18 0.373±0.15

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