C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 4518
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182638 Gm4518-001 ENSMUSG00000098123 10090 - 17:61780915-61781632 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000182638
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000182638 0.479±0.38 0.239±0.08 1.929±1.50 0.553±0.66 0.781±0.57 0.162±0.05 0.476±0.35 0.292±0.23 0.590±0.79 0.055±0.01 0.468±0.15 0.182±0.09 0.149±0.04 0.064±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000760 CIL_000760_0002 CGP 17:58999618-62881317

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 0 399
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 893
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 893
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 893
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 893
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 893
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 0 396
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 750
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 719
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 763
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 418
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 640
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 608
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 804
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 712
ENST00000429913 GAPDHP29-001 processed_pseudogene Homo_sapiens 0 569
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 688
ENST00000436626 GAPDHP48-001 processed_pseudogene Homo_sapiens 0 453
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 603
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 612
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 473
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 540
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 496
ENST00000445880 RP1-52D1.1-001 processed_pseudogene Homo_sapiens 9e-34 145
ENST00000447061 GAPDHP25-001 processed_pseudogene Homo_sapiens 0 708
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 638
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 833
ENST00000455134 GAPDHP28-001 processed_pseudogene Homo_sapiens 0 627
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 617
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 893
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 893
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 472
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 553
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 665
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 665
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 715
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 505
ENST00000512110 AC007016.3-001 processed_pseudogene Homo_sapiens 0 289
ENST00000513369 RP11-159J3.1-001 processed_pseudogene Homo_sapiens 0 765
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 712
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 728
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 488
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 634
ENST00000520713 ANKRD46-009 processed_transcript Homo_sapiens 0 634
ENST00000524319 ANKRD46-003 processed_transcript Homo_sapiens 0 634
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 427
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 893

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