C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene, 27023
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182372 Gm27023-001 ENSMUSG00000098156 10090 + 17:61781683-61781967 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000182372
Transcript ID Adipose Bladder Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000182372 0.338±0.00 0.125±0.03 0.288±0.03 0.277±0.03 0.038±0.00 0.610±0.21 0.525±0.00 0.223±0.18 0.373±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000760 CIL_000760_0002 CGP 17:58999618-62881317

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 329
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 289
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 307
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 329
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 329
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 219
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 233
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 0 207
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 228
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 274
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 243
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 296
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 246
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 270
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 231
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 7.9874e-44 182
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 196
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 220
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 313
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 289
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 289
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 289
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 307
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 252
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 265
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 207
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 4.99997e-41 172
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 222
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 250
ENST00000515281 GAPDHP70-001 processed_pseudogene Homo_sapiens 1.00053e-42 178
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 272

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