C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0009B1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1453 VISTA 9606 3:193659729-194262381
GeneTranscriptPositionBiotype
ENSG00000114315 (HES1)
hes family bHLH transcription factor 1 		ENST00000232424 (HES1-001) 194136145-194138732 protein_coding
ENST00000476918 (HES1-002) 194136148-194137284 retained_intron
ENSG00000198836 (OPA1)
optic atrophy 1 (autosomal dominant) 		ENST00000361150 (OPA1-201) 193593144-193697810 protein_coding
ENST00000361510 (OPA1-202) 193593144-193697810 protein_coding
ENST00000361715 (OPA1-203) 193593144-193697810 protein_coding
ENST00000361828 (OPA1-204) 193593144-193697810 protein_coding
ENST00000361908 (OPA1-001) 193593144-193697811 protein_coding
ENST00000392436 (OPA1-005) 193593352-193626144 protein_coding
ENST00000392437 (OPA1-004) 193593247-193618920 protein_coding
ENST00000392438 (OPA1-002) 193593144-193697823 protein_coding
ENST00000419435 (OPA1-011) 193593281-193618937 protein_coding
ENST00000429164 (OPA1-010) 193667176-193668621 protein_coding
ENST00000434811 (OPA1-006) 193614992-193637212 protein_coding
ENST00000445863 (OPA1-009) 193662891-193668931 protein_coding
ENST00000475899 (OPA1-015) 193637216-193644151 retained_intron
ENST00000482865 (OPA1-014) 193648766-193659514 retained_intron
ENST00000483516 (OPA1-008) 193645612-193648460 retained_intron
ENST00000487986 (OPA1-012) 193614788-193628544 processed_transcript
ENST00000495261 (OPA1-003) 193691394-193697526 retained_intron
ENST00000495476 (OPA1-007) 193626058-193638048 retained_intron
ENST00000497189 (OPA1-013) 193618827-193642985 retained_intron
ENSG00000214146 (RP11-699L21.1)
 ENST00000397645 (RP11-699L21.1-001) 193957372-194003659 lincRNA
ENST00000414309 (RP11-699L21.1-002) 194001857-194003636 lincRNA
ENSG00000224403 (DPPA2P3)
developmental pluripotency associated 2 pseudogene 3 		ENST00000411853 (DPPA2P3-001) 193993331-193993985 processed_pseudogene
ENSG00000225742 (RP11-513G11.4)
 ENST00000415869 (RP11-513G11.4-001) 194203016-194250153 lincRNA
ENST00000432908 (RP11-513G11.4-002) 194203480-194206307 lincRNA
ENSG00000229155 (RP11-528A4.2)
 ENST00000439074 (RP11-528A4.2-002) 193842560-193844009 lincRNA
ENST00000445168 (RP11-528A4.2-001) 193842811-193844024 lincRNA
ENSG00000229964 (RP11-135A1.3)
 ENST00000457815 (RP11-135A1.3-001) 194091561-194109174 lincRNA
ENSG00000230102 (RP11-407B7.1)
 ENST00000420947 (RP11-407B7.1-005) 194015443-194057679 lincRNA
ENST00000432154 (RP11-407B7.1-001) 194048920-194069529 lincRNA
ENST00000443776 (RP11-407B7.1-004) 194052381-194058477 lincRNA
ENST00000449350 (RP11-407B7.1-002) 194009458-194070952 lincRNA
ENST00000458224 (RP11-407B7.1-003) 194005456-194070970 lincRNA
ENST00000593326 (RP11-407B7.1-011) 194043124-194049127 lincRNA
ENST00000593559 (RP11-407B7.1-008) 194043165-194049342 lincRNA
ENST00000597775 (RP11-407B7.1-010) 194043163-194049340 lincRNA
ENST00000597974 (RP11-407B7.1-015) 194055479-194058449 lincRNA
ENST00000598535 (RP11-407B7.1-007) 194042911-194049342 lincRNA
ENST00000599153 (RP11-407B7.1-012) 194043697-194049333 lincRNA
ENST00000599441 (RP11-407B7.1-006) 194005437-194049342 lincRNA
ENST00000599735 (RP11-407B7.1-013) 194055479-194058518 retained_intron
ENST00000601524 (RP11-407B7.1-014) 194055479-194058389 retained_intron
ENST00000601913 (RP11-407B7.1-009) 194043190-194049342 lincRNA
ENST00000609015 (RP11-407B7.1-018) 194048919-194058449 lincRNA
ENST00000609304 (RP11-407B7.1-017) 194057637-194061736 lincRNA
ENST00000609933 (RP11-407B7.1-016) 194057637-194065428 lincRNA
ENST00000610423 (RP11-407B7.1-019) 194055479-194058493 lincRNA
ENST00000620876 (RP11-407B7.1-020) 194055479-194058451 lincRNA
ENST00000622169 (RP11-407B7.1-021) 194005259-194015635 lincRNA
ENSG00000232874 (RP11-135A1.2)
 ENST00000418353 (RP11-135A1.2-001) 194130616-194131201 antisense
ENSG00000238043 (RP11-699L21.2)
 ENST00000426616 (RP11-699L21.2-001) 193980614-194006098 lincRNA
ENSG00000238097 (RP11-513G11.3)
 ENST00000455821 (RP11-513G11.3-001) 194247648-194257772 lincRNA
ENSG00000276407 (RP11-407B7.3)
 ENST00000615240 (RP11-407B7.3-001) 194070239-194080443 lincRNA
ENST00000615650 (RP11-407B7.3-002) 194070103-194078468 lincRNA
CIL_0009B1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1453 VISTA 10090 16:29593116-30195809
GeneTranscriptPositionBiotype
ENSMUSG00000022528 (Hes1)
hairy and enhancer of split 1 (Drosophila) 		ENSMUST00000023171 (Hes1-001) 30065340-30067796 protein_coding
ENSMUST00000160592 (Hes1-004) 30064384-30065569 processed_transcript
ENSMUST00000161676 (Hes1-003) 30066097-30067123 retained_intron
ENSMUST00000161839 (Hes1-002) 30066338-30067319 processed_transcript
ENSMUSG00000038084 (Opa1)
optic atrophy 1 		ENSMUST00000038867 (Opa1-003) 29579380-29651876 protein_coding
ENSMUST00000159036 (Opa1-004) 29579378-29614624 retained_intron
ENSMUST00000160101 (Opa1-006) 29616625-29618707 retained_intron
ENSMUST00000160153 (Opa1-005) 29579392-29651879 retained_intron
ENSMUST00000160475 (Opa1-002) 29579380-29630404 nonsense_mediated_decay
ENSMUST00000160597 (Opa1-001) 29579334-29654884 protein_coding
ENSMUST00000161186 (Opa1-008) 29579380-29649000 protein_coding
ENSMUST00000162240 (Opa1-007) 29587014-29610906 protein_coding
ENSMUSG00000075286 (Gm1968)
predicted gene 1968 		ENSMUST00000100016 (Gm1968-201) 29958493-29962307 protein_coding
ENSMUSG00000097184 (4632428C04Rik)
RIKEN cDNA 4632428C04 gene 		ENSMUST00000181485 (4632428C04Rik-201) 30008667-30021430 lincRNA
ENSMUSG00000097307 (Gm26834)
predicted gene, 26834 		ENSMUST00000181815 (Gm26834-201) 29811058-29837814 lincRNA
ENSMUSG00000097313 (Gm26569)
predicted gene, 26569 		ENSMUST00000181968 (Gm26569-201) 29907519-29946517 lincRNA
ENSMUSG00000101888 (RP23-11P15.2)
RIKEN cDNA 1700025H01 gene 		ENSMUST00000187479 (RP23-11P15.2-001) 30195071-30200299 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0009B1_0001ENSG00000114315ENST00000232424ENST00000476918ENSG00000198836ENST00000361150ENST00000361510ENST00000361715ENST00000361828ENST00000361908ENST00000392436ENST00000392437ENST00000392438ENST00000419435ENST00000429164ENST00000434811ENST00000445863ENST00000475899ENST00000482865ENST00000483516ENST00000487986ENST00000495261ENST00000495476ENST00000497189ENSG00000214146ENST00000397645ENST00000414309ENSG00000224403ENST00000411853ENSG00000225742ENST00000415869ENST00000432908ENSG00000229155ENST00000439074ENST00000445168ENSG00000229964ENST00000457815ENSG00000230102ENST00000420947ENST00000432154ENST00000443776ENST00000449350ENST00000458224ENST00000593326ENST00000593559ENST00000597775ENST00000597974ENST00000598535ENST00000599153ENST00000599441ENST00000599735ENST00000601524ENST00000601913ENST00000609015ENST00000609304ENST00000609933ENST00000610423ENST00000620876ENST00000622169ENSG00000232874ENST00000418353ENSG00000238043ENST00000426616ENSG00000238097ENST00000455821ENSG00000276407ENST00000615240ENST00000615650CIL_0009B1_0002ENSMUSG00000022528ENSMUST00000023171ENSMUST00000160592ENSMUST00000161676ENSMUST00000161839ENSMUSG00000038084ENSMUST00000038867ENSMUST00000159036ENSMUST00000160101ENSMUST00000160153ENSMUST00000160475ENSMUST00000160597ENSMUST00000161186ENSMUST00000162240ENSMUSG00000075286ENSMUST00000100016ENSMUSG00000097184ENSMUST00000181485ENSMUSG00000097307ENSMUST00000181815ENSMUSG00000097313ENSMUST00000181968ENSMUSG00000101888ENSMUST00000187479
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0009B1_0001ENSG00000114315ENST00000232424ENST00000476918ENSG00000198836ENST00000361150ENST00000361510ENST00000361715ENST00000361828ENST00000361908ENST00000392438ENSG00000214146ENST00000397645ENST00000414309ENSG00000224403ENST00000411853ENSG00000225742ENST00000415869ENSG00000229155ENST00000439074ENST00000445168ENSG00000229964ENST00000457815ENSG00000230102ENST00000420947ENST00000432154ENST00000449350ENST00000458224ENST00000599153ENST00000599441ENST00000601524ENST00000609015ENST00000609933ENST00000622169ENSG00000232874ENST00000418353ENSG00000238043ENST00000426616ENSG00000238097ENST00000455821ENSG00000276407ENST00000615240ENST00000615650CIL_0009B1_0002ENSMUSG00000022528ENSMUST00000023171ENSMUST00000161676ENSMUST00000161839ENSMUSG00000038084ENSMUST00000038867ENSMUST00000159036ENSMUST00000160153ENSMUST00000160597ENSMUST00000161186ENSMUSG00000075286ENSMUST00000100016ENSMUSG00000097184ENSMUST00000181485ENSMUSG00000097307ENSMUST00000181815ENSMUSG00000097313ENSMUST00000181968ENSMUSG00000101888ENSMUST00000187479
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000114315 ENST00000232424 18.832±0.00 14.011±0.00 5.316±0.00 2.463±0.37 10.160±2.89 7.947±1.63 2.322±0.93 12.817±9.85 7.715±1.55 21.694±13.98 8.515±1.76 34.589±16.81 16.048±1.08 11.201±0.16
ENST00000476918 N/A N/A N/A N/A N/A N/A N/A N/A 3.508±0.00 N/A N/A N/A N/A N/A
ENSG00000198836 ENST00000361150 N/A N/A 1.393±0.00 N/A 2.361±0.00 N/A N/A 1.753±0.00 N/A N/A N/A 1.224±0.39 0.520±0.00 1.797±0.00
ENST00000361510 N/A N/A N/A N/A N/A N/A N/A 2.236±0.00 N/A N/A N/A 1.218±0.70 N/A N/A
ENST00000361715 N/A N/A N/A N/A N/A 1.226±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000361828 3.938±0.00 N/A N/A N/A 2.416±0.00 N/A N/A N/A 0.966±0.00 N/A N/A N/A 1.012±0.00 N/A
ENST00000361908 3.363±0.00 3.295±0.00 0.900±0.00 N/A 2.484±0.00 8.811±0.00 3.050±1.07 2.507±0.00 2.961±0.59 1.874±0.64 2.146±0.03 1.789±0.93 1.816±1.01 2.458±0.00
ENST00000392436 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000392437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000392438 N/A 3.435±0.00 0.520±0.00 7.967±1.96 2.270±0.59 3.825±0.00 4.512±0.00 N/A 3.231±0.00 1.885±1.43 0.618±0.00 2.163±0.35 1.622±0.10 3.679±0.17
ENST00000419435 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000429164 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434811 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000445863 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475899 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487986 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495476 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000214146 ENST00000397645 N/A N/A N/A 0.008±0.00 0.036±0.00 N/A 0.020±0.00 N/A N/A N/A N/A 0.072±0.00 0.032±0.00 0.195±0.03
ENST00000414309 N/A N/A N/A 0.024±0.00 0.054±0.00 0.061±0.00 0.021±0.00 0.208±0.05 0.139±0.00 N/A N/A 0.193±0.14 0.283±0.00 0.429±0.07
ENSG00000224403 ENST00000411853 0.043±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.332±0.19 N/A N/A
ENSG00000225742 ENST00000415869 N/A N/A N/A 0.038±0.00 0.107±0.00 N/A 0.065±0.00 N/A 0.031±0.00 0.156±0.00 N/A 0.096±0.00 0.237±0.08 0.567±0.05
ENST00000432908 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000229155 ENST00000439074 N/A N/A N/A N/A N/A N/A N/A 0.586±0.00 0.025±0.00 0.690±0.00 N/A 0.256±0.13 N/A N/A
ENST00000445168 N/A N/A N/A N/A N/A 0.339±0.00 N/A 0.190±0.00 N/A N/A N/A N/A N/A 0.044±0.00
ENSG00000229964 ENST00000457815 N/A N/A N/A N/A N/A N/A N/A N/A 0.187±0.00 N/A N/A N/A N/A 0.417±0.18
ENSG00000230102 ENST00000420947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.336±0.01 N/A
ENST00000432154 N/A 0.031±0.00 N/A N/A N/A 0.014±0.00 0.010±0.00 0.078±0.05 N/A 0.013±0.00 N/A N/A N/A N/A
ENST00000443776 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449350 N/A N/A N/A 0.205±0.13 0.240±0.00 0.050±0.00 N/A 0.072±0.00 0.231±0.00 0.047±0.00 0.056±0.00 0.015±0.01 0.344±0.11 N/A
ENST00000458224 0.145±0.00 N/A N/A N/A 0.213±0.00 N/A 0.034±0.00 N/A N/A N/A 0.542±0.00 N/A N/A N/A
ENST00000593326 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000597775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000597974 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598535 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599153 N/A N/A N/A N/A 0.719±0.00 N/A N/A 0.548±0.00 N/A N/A N/A 0.052±0.00 N/A N/A
ENST00000599441 N/A N/A N/A 0.172±0.00 N/A N/A N/A N/A N/A N/A N/A 0.050±0.02 N/A N/A
ENST00000599735 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601524 N/A N/A N/A N/A 0.325±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601913 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609015 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.047±0.00 N/A 12.742±0.00
ENST00000609304 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609933 N/A 0.020±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.049±0.00 N/A N/A
ENST00000610423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620876 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622169 N/A N/A 0.090±0.00 N/A N/A N/A N/A N/A 0.108±0.00 N/A N/A N/A N/A N/A
ENSG00000232874 ENST00000418353 N/A 0.388±0.00 N/A N/A 0.156±0.00 N/A N/A 0.466±0.00 0.407±0.24 0.372±0.00 N/A 0.351±0.27 0.150±0.00 N/A
ENSG00000238043 ENST00000426616 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.064±0.00
ENSG00000238097 ENST00000455821 0.027±0.00 0.029±0.00 N/A 0.047±0.00 0.015±0.00 0.027±0.00 N/A 0.319±0.29 2.152±0.00 N/A N/A 0.017±0.00 0.227±0.21 0.047±0.01
ENSG00000276407 ENST00000615240 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.109±0.05
ENST00000615650 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.822±0.13
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022528 ENSMUST00000023171 7.682±3.64 22.619±12.11 57.739±14.91 8.707±3.59 14.063±9.52 53.718±11.65 7.751±3.82 15.399±5.15 5.775±1.25 34.966±16.19 5.650±0.80 26.347±10.95 8.124±3.72 1.221±0.62
ENSMUST00000160592 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161676 12.095±2.87 52.734±15.54 52.939±13.91 17.061±1.77 81.086±30.92 118.290±34.03 13.028±0.14 22.246±12.30 9.155±2.08 78.146±31.16 N/A 86.659±39.27 8.491±0.06 3.830±0.00
ENSMUST00000161839 3.926±0.00 20.283±5.99 N/A 4.840±0.00 26.666±3.65 65.628±18.83 N/A 9.960±0.00 N/A 30.486±10.47 N/A 66.481±15.61 N/A N/A
ENSMUSG00000038084 ENSMUST00000038867 N/A N/A N/A N/A N/A N/A N/A N/A 2.388±0.44 N/A 2.899±0.00 4.679±0.69 6.891±1.65 N/A
ENSMUST00000159036 N/A 10.306±2.56 N/A N/A N/A 2.768±0.70 N/A N/A 4.619±0.80 N/A N/A 4.758±1.29 N/A N/A
ENSMUST00000160101 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160153 1.618±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160475 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160597 7.647±2.39 6.028±1.32 9.129±0.18 13.034±0.79 5.021±2.84 5.111±0.48 15.697±0.50 10.639±0.24 4.113±1.24 2.863±1.58 10.473±3.51 4.671±2.14 4.982±2.05 1.980±1.04
ENSMUST00000161186 N/A N/A N/A 17.047±0.00 N/A N/A N/A N/A 2.831±0.52 N/A N/A 7.668±4.36 5.790±3.06 6.000±5.74
ENSMUST00000162240 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000075286 ENSMUST00000100016 N/A N/A 0.092±0.00 N/A N/A N/A N/A N/A N/A 0.385±0.07 0.193±0.00 0.466±0.08 N/A N/A
ENSMUSG00000097184 ENSMUST00000181485 0.171±0.09 0.155±0.04 N/A 0.080±0.08 N/A 0.827±0.27 0.809±0.60 0.531±0.00 0.150±0.05 1.257±0.25 0.303±0.12 0.130±0.04 0.227±0.15 0.071±0.03
ENSMUSG00000097307 ENSMUST00000181815 0.048±0.00 N/A 0.096±0.00 0.025±0.01 N/A 0.076±0.00 N/A 0.038±0.00 0.010±0.00 0.043±0.00 0.091±0.04 0.195±0.09 N/A 0.054±0.01
ENSMUSG00000097313 ENSMUST00000181968 0.092±0.05 0.366±0.08 0.151±0.00 0.017±0.01 0.064±0.03 0.128±0.08 0.067±0.01 0.092±0.03 0.238±0.20 0.333±0.10 0.044±0.03 0.177±0.13 0.130±0.10 0.014±0.01
ENSMUSG00000101888 ENSMUST00000187479 N/A N/A N/A N/A N/A N/A N/A N/A 0.066±0.00 0.101±0.00 N/A 0.329±0.11 0.045±0.00 8.232±6.16

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