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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | secreted protein, acidic, cysteine-rich (osteonectin) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000538026  |
SPARC-008 |
ENSG00000113140 |
9606 | - |
5:151666373-151686963  |
protein_coding |
|
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00025X | CIL_00025X_0001 | CGP | 5:151504093-151687165 |
| CIL_0007IC | CIL_0007IC_0002 | CGP | 5:151661096-151772532 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005509 | IEA | calcium ion binding |
| GO:0005515 | IEA | protein binding |
| GO:0005578 | IEA | proteinaceous extracellular matrix |
| GO:0007165 | IEA | signal transduction |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000108858
|
Sparc-002 | protein_coding | Mus_musculus | 0 | 736 |
|
ENSMUST00000018737
|
Sparc-001 | protein_coding | Mus_musculus | 0 | 736 |
|
ENSMUST00000130642
|
Sparc-005 | processed_transcript | Mus_musculus | 0 | 568 |
|
ENSMUST00000141530
|
Sparc-003 | protein_coding | Mus_musculus | 0 | 460 |
|
ENSDART00000135627
|
sparc-002 | protein_coding | Danio_rerio | 0 | 425 |
|
ENSDART00000039660
|
sparc-001 | protein_coding | Danio_rerio | 0 | 425 |
|
ENSMUST00000123775
|
Sparc-006 | processed_transcript | Mus_musculus | 0 | 363 |
|
ENSDART00000141304
|
sparc-004 | protein_coding | Danio_rerio | 0 | 219 |
|
ENSDART00000142572
|
sparc-005 | retained_intron | Danio_rerio | 0 | 196 |
