C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: H3 histone, family 3A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000137017 h3f3a-001 ENSDARG00000045248 7955 + 24:39191743-39196042 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000137017
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000137017 43.596±40.27 36.875±17.51 58.177±20.81 15.177±0.00 38.358±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 IDA nucleosome
GO:0003677 IEA DNA binding
GO:0006334 IEA nucleosome assembly
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000016703 H3f3b-201 protein_coding Mus_musculus 0 322
ENSMUST00000106454 H3f3b-001 protein_coding Mus_musculus 0 322
ENSMUST00000122447 Gm12260-001 unprocessed_pseudogene Mus_musculus 0 292
ENSMUST00000139623 H3f3b-002 processed_transcript Mus_musculus 0 228
ENSMUST00000160676 Gm6485-001 processed_pseudogene Mus_musculus 0 270
ENST00000254810 H3F3B-001 protein_coding Homo_sapiens 0 344
ENST00000340398 H3F3C-001 protein_coding Homo_sapiens 0 324
ENST00000586270 H3F3B-006 protein_coding Homo_sapiens 0 337
ENST00000586518 H3F3B-012 retained_intron Homo_sapiens 2e-27 128
ENST00000586607 H3F3B-003 protein_coding Homo_sapiens 0 344
ENST00000587560 H3F3B-007 protein_coding Homo_sapiens 0 344
ENST00000589599 H3F3B-005 protein_coding Homo_sapiens 0 344
ENST00000589949 H3F3B-008 retained_intron Homo_sapiens 9e-28 128
ENST00000591890 H3F3B-011 protein_coding Homo_sapiens 0 278
ENST00000592643 H3F3B-010 protein_coding Homo_sapiens 3e-27 126
ENST00000593254 H3F3B-002 processed_transcript Homo_sapiens 0 189

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