C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin, heavy polypeptide 8, skeletal muscle, perinatal
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000019625 Myh8-001 ENSMUSG00000055775 10090 + 11:67277124-67308634 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000019625
Transcript ID Bladder Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000019625 0.058±0.02 0.239±0.14 0.033±0.01 0.025±0.01 0.012±0.00 0.460±0.87 23.991±0.27 0.012±0.00 0.021±0.01 0.031±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000146 IEA microfilament motor activity
GO:0003009 IEA skeletal muscle contraction
GO:0003779 IEA actin binding
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0006200 IEA ATP catabolic process
GO:0016459 IDA myosin complex
GO:0016887 IEA ATPase activity
GO:0030049 IEA muscle filament sliding
GO:0032982 IEA myosin filament

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000051360 MYH13 (3 of 10)-201 protein_coding Danio_rerio 0 3648
ENSDART00000098060 myhz1.1-201 protein_coding Danio_rerio 0 3583
ENSDART00000123003 myhz1.1-001 protein_coding Danio_rerio 0 3583
ENSDART00000125917 myhc4-001 protein_coding Danio_rerio 0 3572
ENSDART00000098072 myhz1.1-202 protein_coding Danio_rerio 0 3568
ENSDART00000051362 myhc4-201 protein_coding Danio_rerio 0 3555
ENSDART00000109263 myhz1.1-203 protein_coding Danio_rerio 0 3539
ENSDART00000051361 myhz2-201 protein_coding Danio_rerio 0 3528
ENSDART00000126873 myhz2-001 protein_coding Danio_rerio 0 3528
ENSDART00000122889 myhz1.3-001 protein_coding Danio_rerio 0 3507
ENSDART00000098067 myhz1.2-201 protein_coding Danio_rerio 0 3500
ENSDART00000131983 myhz1.2-001 protein_coding Danio_rerio 0 3500
ENSDART00000139917 myha-001 protein_coding Danio_rerio 0 3480
ENSDART00000156295 myhb-001 protein_coding Danio_rerio 0 3265
ENSDART00000026257 myhb-201 protein_coding Danio_rerio 0 3249
ENSDART00000150162 si:ch211-24n20.3-001 protein_coding Danio_rerio 0 3014
ENSDART00000123920 MYH13 (5 of 10)-202 protein_coding Danio_rerio 0 2996
ENSDART00000135233 si:ch211-24n20.3-201 protein_coding Danio_rerio 0 2970
ENSDART00000066527 smyhc3-201 protein_coding Danio_rerio 0 2970
ENSDART00000150060 smyhc3-001 protein_coding Danio_rerio 0 2970
ENSDART00000133338 CR450736.2-201 protein_coding Danio_rerio 0 2948
ENSDART00000137082 CU633479.6-201 protein_coding Danio_rerio 0 2904
ENSDART00000056849 smyhc2-001 protein_coding Danio_rerio 0 2900
ENSDART00000137989 CU633479.5-201 protein_coding Danio_rerio 0 2883
ENSDART00000056853 smyhc1-203 protein_coding Danio_rerio 0 2863
ENSDART00000128784 vmhcl-001 protein_coding Danio_rerio 0 2372
ENSDART00000099532 vmhc-001 protein_coding Danio_rerio 0 2331
ENSDART00000078958 vmhcl-201 protein_coding Danio_rerio 0 2313
ENSDART00000075210 protein_coding Danio_rerio 0 1561
ENSDART00000130531 myhz1.3-202 protein_coding Danio_rerio 0 1552
ENSDART00000135295 MYH13 (9 of 10)-201 protein_coding Danio_rerio 0 1441
ENSDART00000045928 smyhc1-202 protein_coding Danio_rerio 0 1203
ENSDART00000004536 smyhc1-201 protein_coding Danio_rerio 0 1195
ENSDART00000130036 MYH13 (5 of 10)-201 protein_coding Danio_rerio 0 1055
ENSDART00000127125 myhz1.3-201 protein_coding Danio_rerio 0 721
ENSDART00000098111 myha-201 protein_coding Danio_rerio 0 392
ENSDART00000124862 smyhc2-003 protein_coding Danio_rerio 0 361
ENSDART00000123565 vmhcl-004 protein_coding Danio_rerio 0 327
ENSDART00000141922 vmhcl-002 protein_coding Danio_rerio 0 235
ENSDART00000004854 myh11b-201 protein_coding Danio_rerio 4.06377e-44 185
ENSDART00000148622 myh11b-001 protein_coding Danio_rerio 4.06377e-44 185
ENSDART00000147211 smyhc2-002 retained_intron Danio_rerio 6e-37 161
ENST00000226207 MYH1-001 protein_coding Homo_sapiens 0 6390
ENST00000245503 MYH2-001 protein_coding Homo_sapiens 0 6174
ENST00000252172 MYH13-001 protein_coding Homo_sapiens 0 4189
ENST00000255381 MYH4-001 protein_coding Homo_sapiens 0 5997
ENST00000262873 MYH7B-001 protein_coding Homo_sapiens 0 776
ENST00000355349 MYH7-001 protein_coding Homo_sapiens 0 3613
ENST00000356287 MYH6-001 protein_coding Homo_sapiens 0 3607
ENST00000376970 MYH14-202 protein_coding Homo_sapiens 3e-36 159
ENST00000397183 MYH2-201 protein_coding Homo_sapiens 0 6174
ENST00000403437 MYH8-001 protein_coding Homo_sapiens 0 7182
ENST00000405093 MYH6-201 protein_coding Homo_sapiens 0 3607
ENST00000413734 MYH16-003 processed_transcript Homo_sapiens 0 383
ENST00000418404 MYH13-003 protein_coding Homo_sapiens 0 4189
ENST00000420805 MYH2-002 protein_coding Homo_sapiens 0 595
ENST00000425460 MYH14-203 protein_coding Homo_sapiens 3e-36 159
ENST00000439784 MYH16-001 unitary_pseudogene Homo_sapiens 0 795
ENST00000440075 MYH14-204 protein_coding Homo_sapiens 2e-26 126
ENST00000453194 MYH16-002 processed_transcript Homo_sapiens 0 222
ENST00000470929 MYH7B-002 retained_intron Homo_sapiens 3e-30 137
ENST00000532183 MYH2-006 protein_coding Homo_sapiens 0 2237
ENST00000557461 MYH6-002 retained_intron Homo_sapiens 0 1057
ENST00000578017 MYH2-009 protein_coding Homo_sapiens 0 641
ENST00000579489 MYH3-004 retained_intron Homo_sapiens 0 422
ENST00000583535 MYH3-001 protein_coding Homo_sapiens 0 4335
ENST00000596571 MYH14-008 protein_coding Homo_sapiens 2e-36 159
ENST00000598205 MYH14-006 protein_coding Homo_sapiens 2e-36 159
ENST00000599920 MYH14-007 protein_coding Homo_sapiens 1e-36 159
ENST00000601313 MYH14-001 protein_coding Homo_sapiens 3e-36 159
ENST00000618182 MYH7B-201 protein_coding Homo_sapiens 0 776
ENST00000621918 MYH13-201 protein_coding Homo_sapiens 0 4189
ENST00000622564 MYH2-202 protein_coding Homo_sapiens 0 2237

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