C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ventricular myosin heavy chain-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000123565 vmhcl-004 ENSDARG00000079782 7955 + 2:23574504-23577707 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENSDART00000123565
Transcript ID Brain
ENSDART00000123565 0.526±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004Z7 CIL_0004Z7_0004 CGP 2:23574503-23607626

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003774 IEA motor activity
GO:0005524 IEA ATP binding
GO:0016459 IEA myosin complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000018632 Myh4-001 protein_coding Mus_musculus 0 270
ENSMUST00000018637 Myh1-003 protein_coding Mus_musculus 0 313
ENSMUST00000019625 Myh8-001 protein_coding Mus_musculus 0 327
ENSMUST00000075734 Myh1-201 protein_coding Mus_musculus 0 313
ENSMUST00000081911 Myh13-201 protein_coding Mus_musculus 0 331
ENSMUST00000108684 Myh13-001 protein_coding Mus_musculus 0 331
ENSMUST00000108685 Myh8-003 protein_coding Mus_musculus 0 235
ENSMUST00000108686 Myh8-002 retained_intron Mus_musculus 0 327
ENSMUST00000124516 Myh1-001 protein_coding Mus_musculus 0 313
ENSMUST00000139052 Myh8-004 retained_intron Mus_musculus 0 272
ENSMUST00000170942 Myh4-201 protein_coding Mus_musculus 0 270
ENSMUST00000180845 Myh13-002 protein_coding Mus_musculus 0 331
ENST00000245503 MYH2-001 protein_coding Homo_sapiens 0 320
ENST00000252172 MYH13-001 protein_coding Homo_sapiens 0 342
ENST00000255381 MYH4-001 protein_coding Homo_sapiens 0 300
ENST00000356287 MYH6-001 protein_coding Homo_sapiens 0 420
ENST00000397183 MYH2-201 protein_coding Homo_sapiens 0 320
ENST00000403437 MYH8-001 protein_coding Homo_sapiens 0 322
ENST00000405093 MYH6-201 protein_coding Homo_sapiens 0 420
ENST00000418404 MYH13-003 protein_coding Homo_sapiens 0 342
ENST00000420805 MYH2-002 protein_coding Homo_sapiens 0 259
ENST00000532183 MYH2-006 protein_coding Homo_sapiens 0 320
ENST00000557461 MYH6-002 retained_intron Homo_sapiens 0 420
ENST00000578017 MYH2-009 protein_coding Homo_sapiens 0 283
ENST00000579489 MYH3-004 retained_intron Homo_sapiens 5.04467e-44 182
ENST00000583535 MYH3-001 protein_coding Homo_sapiens 0 268
ENST00000621918 MYH13-201 protein_coding Homo_sapiens 0 342
ENST00000622564 MYH2-202 protein_coding Homo_sapiens 0 320

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