C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 9800
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000052615 Gm9800-201 ENSMUSG00000045799 10090 - 14:8799589-8800504 pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000052615
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000052615 4.540±2.01 22.730±8.36 38.200±32.97 38.562±45.95 4.808±2.36 8.551±6.80 3.284±0.58 16.492±6.92 38.238±53.91 10.242±1.19 0.284±0.20 27.605±28.02 2.302±2.84 2.601±1.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00034H CIL_00034H_0002 CGP 14:8431192-11162035

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000341369 PTMA-002 protein_coding Homo_sapiens 0 1037
ENST00000397729 PTMAP8-001 processed_pseudogene Homo_sapiens 0 366
ENST00000409115 PTMA-001 protein_coding Homo_sapiens 0 1027
ENST00000409321 PTMA-012 protein_coding Homo_sapiens 0 662
ENST00000409683 PTMA-007 protein_coding Homo_sapiens 0 981
ENST00000410064 PTMA-004 protein_coding Homo_sapiens 0 420
ENST00000411648 PTMAP1-001 processed_pseudogene Homo_sapiens 0 222
ENST00000412128 PTMA-008 protein_coding Homo_sapiens 0 859
ENST00000442851 PTMAP1-001 processed_pseudogene Homo_sapiens 0 228
ENST00000444251 PTMAP1-001 processed_pseudogene Homo_sapiens 0 222
ENST00000447774 PTMAP1-001 processed_pseudogene Homo_sapiens 0 222
ENST00000448874 PTMA-011 nonsense_mediated_decay Homo_sapiens 0 861
ENST00000455552 PTMAP1-001 processed_pseudogene Homo_sapiens 0 222
ENST00000456700 PTMAP1-001 processed_pseudogene Homo_sapiens 0 222
ENST00000457022 PTMAP1-001 processed_pseudogene Homo_sapiens 0 222
ENST00000466801 PTMA-013 processed_transcript Homo_sapiens 0 527
ENST00000467816 PTMA-010 retained_intron Homo_sapiens 0 228
ENST00000468027 PTMA-006 retained_intron Homo_sapiens 0 499
ENST00000481928 PTMA-003 retained_intron Homo_sapiens 0 791
ENST00000607242 PTMAP5-002 processed_transcript Homo_sapiens 0 955
ENST00000612829 PTMA-201 protein_coding Homo_sapiens 0 863

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