C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: actin, beta-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000054716 Actbl2-201 ENSMUSG00000055194 10090 + 13:111255013-111257749 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastLiverLungMuscleOvaryPlacentaTestisENSMUST00000054716
Transcript ID Adipose Adrenal Bladder Brain Breast Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000054716 0.030±0.02 0.054±0.00 0.027±0.01 0.012±0.01 0.016±0.00 0.003±0.00 0.018±0.00 0.048±0.00 0.032±0.03 0.008±0.00 0.020±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089Y CIL_00089Y_0002 VISTA 13:111045678-111646779

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005524 IEA ATP binding
GO:0005615 IEA extracellular space
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0008150 ND biological_process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000054987 actb1-001 protein_coding Danio_rerio 0 839
ENSDART00000141737 actb2-001 protein_coding Danio_rerio 0 817
ENSDART00000055194 actb2-007 protein_coding Danio_rerio 0 817
ENSDART00000080664 protein_coding Danio_rerio 0 737
ENSDART00000133319 actb1-005 protein_coding Danio_rerio 0 712
ENSDART00000138324 actb1-004 protein_coding Danio_rerio 0 544
ENSDART00000132497 actb2-006 retained_intron Danio_rerio 0 442
ENSDART00000148067 actb1-003 processed_transcript Danio_rerio 0 418
ENSDART00000141407 actb1-002 protein_coding Danio_rerio 0 357
ENSDART00000134924 actb2-004 retained_intron Danio_rerio 0 248
ENSDART00000135971 actb2-005 retained_intron Danio_rerio 0 248
ENSDART00000148290 actb2-002 nonsense_mediated_decay Danio_rerio 0 248
ENST00000423391 ACTBL2-001 protein_coding Homo_sapiens 0 1474

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