C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: actin, beta 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000138324 actb1-004 ENSDARG00000037746 7955 - 1:7726280-7728732 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000039631 Acta2-201 protein_coding Mus_musculus 0 573
ENSMUST00000054716 Actbl2-201 protein_coding Mus_musculus 0 544
ENSMUST00000075161 Actg2-001 protein_coding Mus_musculus 0 547
ENSMUST00000090269 Actc1-001 protein_coding Mus_musculus 0 577
ENSMUST00000100497 Actb-001 protein_coding Mus_musculus 0 795
ENSMUST00000106216 Actb-006 protein_coding Mus_musculus 0 510
ENSMUST00000119663 Gm4760-001 processed_pseudogene Mus_musculus 0 424
ENSMUST00000121731 Actg2-002 protein_coding Mus_musculus 0 547
ENSMUST00000124933 Actg2-006 processed_transcript Mus_musculus 0 195
ENSMUST00000140208 Gm8464-002 processed_transcript Mus_musculus 0 547
ENSMUST00000141904 Actg2-005 protein_coding Mus_musculus 0 547
ENSMUST00000146697 Gm8464-001 transcribed_processed_pseudogene Mus_musculus 0 547
ENSMUST00000151942 Gm4750-001 transcribed_processed_pseudogene Mus_musculus 0 547
ENSMUST00000152029 Actg2-004 protein_coding Mus_musculus 0 481
ENSMUST00000152262 Gm4750-002 processed_transcript Mus_musculus 0 547
ENSMUST00000164765 Actb-005 retained_intron Mus_musculus 0 302
ENSMUST00000165629 Actb-008 retained_intron Mus_musculus 0 412
ENSMUST00000167386 Actb-003 processed_transcript Mus_musculus 0 411
ENSMUST00000167721 Actb-002 protein_coding Mus_musculus 0 390
ENSMUST00000171419 Actb-007 protein_coding Mus_musculus 0 795
ENST00000345517 ACTG2-001 protein_coding Homo_sapiens 0 586
ENST00000356920 POTEE-001 protein_coding Homo_sapiens 0 675
ENST00000357462 POTEF-201 protein_coding Homo_sapiens 0 671
ENST00000366683 ACTA1-201 protein_coding Homo_sapiens 0 370
ENST00000366684 ACTA1-001 protein_coding Homo_sapiens 0 562
ENST00000403258 ACTBP8-001 processed_pseudogene Homo_sapiens 0 510
ENST00000409602 POTEJ-001 protein_coding Homo_sapiens 0 676
ENST00000409624 ACTG2-002 protein_coding Homo_sapiens 0 586
ENST00000409914 POTEF-001 protein_coding Homo_sapiens 0 671
ENST00000411655 ACTBP14-001 processed_pseudogene Homo_sapiens 0 490
ENST00000425123 ACTG1P4-001 processed_pseudogene Homo_sapiens 0 449
ENST00000431536 RP4-706L14.2-001 processed_pseudogene Homo_sapiens 0 446
ENST00000438944 RP11-480I12.9-001 transcribed_processed_pseudogene Homo_sapiens 0 307
ENST00000442912 ACTG2-010 protein_coding Homo_sapiens 0 324
ENST00000446382 ACTG1P14-001 processed_pseudogene Homo_sapiens 0 529
ENST00000451531 POTEI-001 protein_coding Homo_sapiens 0 682
ENST00000491397 AMY2B-003 processed_transcript Homo_sapiens 0 449
ENST00000502306 CTD-2313D3.1-001 processed_pseudogene Homo_sapiens 0 379
ENST00000564713 RP11-429P3.4-001 transcribed_processed_pseudogene Homo_sapiens 0.00000000000002 84
ENST00000570019 RP11-602M11.3-001 processed_pseudogene Homo_sapiens 0 446

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