C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: actin, beta 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000141407 actb1-002 ENSDARG00000037746 7955 - 1:7726180-7728739 protein_coding

Danio rerio EnsemblZv9

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034453 Acta1-201 protein_coding Mus_musculus 0 442
ENSMUST00000039631 Acta2-201 protein_coding Mus_musculus 0 420
ENSMUST00000054716 Actbl2-201 protein_coding Mus_musculus 0 357
ENSMUST00000075161 Actg2-001 protein_coding Mus_musculus 0 305
ENSMUST00000078717 Lrrc58-001 protein_coding Mus_musculus 0 505
ENSMUST00000090269 Actc1-001 protein_coding Mus_musculus 0 298
ENSMUST00000100497 Actb-001 protein_coding Mus_musculus 0 529
ENSMUST00000106216 Actb-006 protein_coding Mus_musculus 0 411
ENSMUST00000119420 Gm4918-001 processed_pseudogene Mus_musculus 0 353
ENSMUST00000119663 Gm4760-001 processed_pseudogene Mus_musculus 0 241
ENSMUST00000119947 Gm15725-001 transcribed_processed_pseudogene Mus_musculus 0 505
ENSMUST00000121731 Actg2-002 protein_coding Mus_musculus 0 305
ENSMUST00000124933 Actg2-006 processed_transcript Mus_musculus 0 475
ENSMUST00000140208 Gm8464-002 processed_transcript Mus_musculus 0 418
ENSMUST00000141904 Actg2-005 protein_coding Mus_musculus 0 305
ENSMUST00000146697 Gm8464-001 transcribed_processed_pseudogene Mus_musculus 0 418
ENSMUST00000151942 Gm4750-001 transcribed_processed_pseudogene Mus_musculus 0 418
ENSMUST00000152029 Actg2-004 protein_coding Mus_musculus 0 305
ENSMUST00000152262 Gm4750-002 processed_transcript Mus_musculus 0 418
ENSMUST00000164765 Actb-005 retained_intron Mus_musculus 0 302
ENSMUST00000165629 Actb-008 retained_intron Mus_musculus 0 412
ENSMUST00000167386 Actb-003 processed_transcript Mus_musculus 0 791
ENSMUST00000167721 Actb-002 protein_coding Mus_musculus 0 529
ENSMUST00000171419 Actb-007 protein_coding Mus_musculus 0 520
ENST00000345517 ACTG2-001 protein_coding Homo_sapiens 0 390
ENST00000356920 POTEE-001 protein_coding Homo_sapiens 0 326
ENST00000357462 POTEF-201 protein_coding Homo_sapiens 0 320
ENST00000366683 ACTA1-201 protein_coding Homo_sapiens 0 294
ENST00000366684 ACTA1-001 protein_coding Homo_sapiens 0 381
ENST00000403258 ACTBP8-001 processed_pseudogene Homo_sapiens 0 412
ENST00000409602 POTEJ-001 protein_coding Homo_sapiens 0 331
ENST00000409624 ACTG2-002 protein_coding Homo_sapiens 0 390
ENST00000409731 ACTG2-008 protein_coding Homo_sapiens 0 390
ENST00000409914 POTEF-001 protein_coding Homo_sapiens 0 320
ENST00000411655 ACTBP14-001 processed_pseudogene Homo_sapiens 0 261
ENST00000425123 ACTG1P4-001 processed_pseudogene Homo_sapiens 0 215
ENST00000428275 ACTG1P10-001 processed_pseudogene Homo_sapiens 0 302
ENST00000431536 RP4-706L14.2-001 processed_pseudogene Homo_sapiens 0 224
ENST00000438902 ACTG2-005 nonsense_mediated_decay Homo_sapiens 0 390
ENST00000438944 RP11-480I12.9-001 transcribed_processed_pseudogene Homo_sapiens 0 213
ENST00000441772 AC139143.2-001 processed_pseudogene Homo_sapiens 0 339
ENST00000442912 ACTG2-010 protein_coding Homo_sapiens 0 326
ENST00000446382 ACTG1P14-001 processed_pseudogene Homo_sapiens 0 409
ENST00000451531 POTEI-001 protein_coding Homo_sapiens 0 337
ENST00000491397 AMY2B-003 processed_transcript Homo_sapiens 0 215
ENST00000502306 CTD-2313D3.1-001 processed_pseudogene Homo_sapiens 0 198
ENST00000564713 RP11-429P3.4-001 transcribed_processed_pseudogene Homo_sapiens 2e-30 137
ENST00000570019 RP11-602M11.3-001 processed_pseudogene Homo_sapiens 0 342

Loading