C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: actin, beta 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000148067 actb1-003 ENSDARG00000037746 7955 - 1:7726193-7728739 processed_transcript

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034453 Acta1-201 protein_coding Mus_musculus 0 551
ENSMUST00000039631 Acta2-201 protein_coding Mus_musculus 0 484
ENSMUST00000054716 Actbl2-201 protein_coding Mus_musculus 0 418
ENSMUST00000078717 Lrrc58-001 protein_coding Mus_musculus 0 512
ENSMUST00000100497 Actb-001 protein_coding Mus_musculus 0 645
ENSMUST00000106216 Actb-006 protein_coding Mus_musculus 0 239
ENSMUST00000119420 Gm4918-001 processed_pseudogene Mus_musculus 0 335
ENSMUST00000119947 Gm15725-001 transcribed_processed_pseudogene Mus_musculus 0 512
ENSMUST00000140208 Gm8464-002 processed_transcript Mus_musculus 0 520
ENSMUST00000146697 Gm8464-001 transcribed_processed_pseudogene Mus_musculus 0 520
ENSMUST00000151942 Gm4750-001 transcribed_processed_pseudogene Mus_musculus 0 520
ENSMUST00000152262 Gm4750-002 processed_transcript Mus_musculus 0 520
ENSMUST00000164765 Actb-005 retained_intron Mus_musculus 1e-31 141
ENSMUST00000165629 Actb-008 retained_intron Mus_musculus 1e-31 141
ENSMUST00000167386 Actb-003 processed_transcript Mus_musculus 0 466
ENSMUST00000167721 Actb-002 protein_coding Mus_musculus 0 512
ENSMUST00000171419 Actb-007 protein_coding Mus_musculus 0 645
ENST00000345517 ACTG2-001 protein_coding Homo_sapiens 0 490
ENST00000366684 ACTA1-001 protein_coding Homo_sapiens 0 473
ENST00000403258 ACTBP8-001 processed_pseudogene Homo_sapiens 0 460
ENST00000409624 ACTG2-002 protein_coding Homo_sapiens 0 490
ENST00000409731 ACTG2-008 protein_coding Homo_sapiens 0 490
ENST00000428275 ACTG1P10-001 processed_pseudogene Homo_sapiens 0 375
ENST00000438902 ACTG2-005 nonsense_mediated_decay Homo_sapiens 0 490
ENST00000441772 AC139143.2-001 processed_pseudogene Homo_sapiens 0 379
ENST00000446382 ACTG1P14-001 processed_pseudogene Homo_sapiens 0 470
ENST00000564713 RP11-429P3.4-001 transcribed_processed_pseudogene Homo_sapiens 9e-29 132
ENST00000570019 RP11-602M11.3-001 processed_pseudogene Homo_sapiens 0 398

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