C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 20445
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000061905 Gm20445-001 ENSMUSG00000092394 10090 + 6:65882779-65883343 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000061905
Transcript ID Bladder Brain Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000061905 0.109±0.00 0.036±0.00 0.106±0.03 0.117±0.13 0.115±0.00 0.273±0.14 0.031±0.01 0.069±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295955 RPL9-001 protein_coding Homo_sapiens 0 542
ENST00000330965 RPL9P7-001 processed_pseudogene Homo_sapiens 0 542
ENST00000393394 RPL9-201 protein_coding Homo_sapiens 0 547
ENST00000418824 UBE2Q2P6-002 processed_transcript Homo_sapiens 0 392
ENST00000437992 RPL9-010 retained_intron Homo_sapiens 0 337
ENST00000449470 RPL9-002 protein_coding Homo_sapiens 0 542
ENST00000463864 CTD-2290C23.1-001 processed_pseudogene Homo_sapiens 0 503
ENST00000466501 UBE2Q2P6-001 transcribed_processed_pseudogene Homo_sapiens 0 547
ENST00000489849 RP11-124G5.1-001 processed_pseudogene Homo_sapiens 0 248
ENST00000503040 RPL9-011 protein_coding Homo_sapiens 0 468
ENST00000503277 RPL9-008 retained_intron Homo_sapiens 0 492
ENST00000504470 RPL9-009 protein_coding Homo_sapiens 0 512
ENST00000506581 RPL9-012 protein_coding Homo_sapiens 0.000000000000002 86
ENST00000508595 RPL9-007 protein_coding Homo_sapiens 0 492
ENST00000511075 RPL9-006 retained_intron Homo_sapiens 0 388
ENST00000514842 RPL9-005 retained_intron Homo_sapiens 0 246

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