C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5414
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000062879 Gm5414-201 ENSMUSG00000064232 10090 - 15:101624028-101628188 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonOvaryENSMUST00000062879
Transcript ID Bladder Colon Ovary
ENSMUST00000062879 0.002±0.00 0.047±0.00 0.021±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033Q CIL_00033Q_000P CGP 15:101563345-101628188

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005198 IEA structural molecule activity
GO:0008150 ND biological_process
GO:0045095 IEA keratin filament

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000252242 KRT5-001 protein_coding Homo_sapiens 0 763
ENST00000252245 KRT75-001 protein_coding Homo_sapiens 0 560
ENST00000252250 KRT6C-001 protein_coding Homo_sapiens 0 1099
ENST00000252252 KRT6B-001 protein_coding Homo_sapiens 0 1098
ENST00000304620 KRT78-001 protein_coding Homo_sapiens 7e-32 143
ENST00000330722 KRT6A-001 protein_coding Homo_sapiens 0 1149
ENST00000359499 KRT78-002 protein_coding Homo_sapiens 0.0000000000002 82
ENST00000399259 KRT8P6-001 processed_pseudogene Homo_sapiens 8e-25 119
ENST00000534154 KRT8P26-001 processed_pseudogene Homo_sapiens 2e-30 137
ENST00000547110 KRT78-003 protein_coding Homo_sapiens 2e-28 130
ENST00000548735 KRT6A-005 retained_intron Homo_sapiens 0 244
ENST00000549420 KRT5-005 protein_coding Homo_sapiens 0 344
ENST00000549898 KRT6A-002 retained_intron Homo_sapiens 0 307
ENST00000551013 KRT5-006 retained_intron Homo_sapiens 4e-36 156
ENST00000551188 KRT5-007 protein_coding Homo_sapiens 0.00000006 62
ENST00000552629 KRT5-002 retained_intron Homo_sapiens 0 728
ENST00000553087 KRT6C-002 retained_intron Homo_sapiens 0 326

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