C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000552629 KRT5-002 ENSG00000186081 9606 - 12:52516128-52520394 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastKidneyLiverENST00000552629
Transcript ID Bladder Breast Kidney Liver
ENST00000552629 0.206±0.00 1.304±0.00 0.357±0.00 0.712±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033Q CIL_00033Q_000N CGP 12:52487174-52520687
CIL_00033Q CIL_00033Q_000K CGP 12:52514575-52553147

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023709 Krt5-001 protein_coding Mus_musculus 0 1760
ENSMUST00000023788 Krt6a-201 protein_coding Mus_musculus 0 1133
ENSMUST00000023786 Krt6b-201 protein_coding Mus_musculus 0 1099
ENSMUST00000042957 Krt75-001 protein_coding Mus_musculus 0 944
ENSMUST00000023714 4732456N10Rik-001 protein_coding Mus_musculus 0 880
ENSMUST00000062879 Gm5414-201 protein_coding Mus_musculus 0 728
ENSMUST00000063292 Krt73-001 protein_coding Mus_musculus 0 676
ENSMUST00000100179 Krt76-001 protein_coding Mus_musculus 0 651
ENSMUST00000100184 Gm5478-201 protein_coding Mus_musculus 0 617
ENSMUST00000023799 Krt79-001 protein_coding Mus_musculus 0 595
ENSMUST00000068904 Krt7-001 protein_coding Mus_musculus 0 571
ENSMUST00000087996 Krt77-001 protein_coding Mus_musculus 0 394
ENSMUST00000023790 Krt1-201 protein_coding Mus_musculus 0 355
ENSMUST00000088049 Krt86-201 protein_coding Mus_musculus 0 298
ENSMUST00000061185 Krt81-201 protein_coding Mus_musculus 0 292
ENSMUST00000147662 Krt7-003 protein_coding Mus_musculus 0 243
ENSMUST00000077196 Krt80-201 protein_coding Mus_musculus 1.99965e-42 178
ENSMUST00000131069 Krt7-002 retained_intron Mus_musculus 2e-37 161

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