C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 5471
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000072732 Gm5471-201 ENSMUSG00000058463 10090 - 15:44971794-44972135 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainMuscleOvaryPlacentaTestisENSMUST00000072732
Transcript ID Adipose Bladder Brain Muscle Ovary Placenta Testis
ENSMUST00000072732 0.213±0.00 0.045±0.00 1.215±0.00 0.218±0.00 0.251±0.00 0.391±0.00 0.374±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005RR CIL_0005RR_0002 CGP 15:44671859-45114934

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310837 EIF1-003 processed_transcript Homo_sapiens 0 213
ENST00000421436 EIF1P1-001 processed_pseudogene Homo_sapiens 0 390
ENST00000423841 EIF1P3-001 processed_pseudogene Homo_sapiens 0 442
ENST00000428233 EIF1P2-001 processed_pseudogene Homo_sapiens 0 268
ENST00000462917 EIF1-002 retained_intron Homo_sapiens 0 270
ENST00000469257 EIF1-001 protein_coding Homo_sapiens 0 521
ENST00000469308 EIF1-005 processed_transcript Homo_sapiens 0 477
ENST00000482111 EIF1-004 retained_intron Homo_sapiens 0 315
ENST00000487533 EIF1P7-001 processed_pseudogene Homo_sapiens 0 425
ENST00000572664 EIF1P4-001 processed_pseudogene Homo_sapiens 0 350
ENST00000585002 EIF1P5-001 unprocessed_pseudogene Homo_sapiens 1e-30 135
ENST00000586699 EIF1-009 protein_coding Homo_sapiens 0 206
ENST00000591776 EIF1-010 protein_coding Homo_sapiens 0 516

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