C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S6, pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000074205 Rps6-ps1-201 ENSMUSG00000063875 10090 + 15:76337616-76338365 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000074205
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000074205 0.081±0.03 1.487±1.36 0.429±0.18 0.145±0.06 0.112±0.00 0.059±0.00 0.501±0.70 0.071±0.00 0.055±0.01 0.277±0.22 0.208±0.20 0.052±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SS CIL_0007SS_0002 VISTA 15:76102685-76704351
CIL_00026V CIL_00026V_0002 CGP 15:76331231-76345934

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315377 RPS6-003 protein_coding Homo_sapiens 0 848
ENST00000366455 AC007618.3-001 processed_pseudogene Homo_sapiens 0 383
ENST00000380384 RPS6-002 protein_coding Homo_sapiens 0 848
ENST00000380394 RPS6-001 protein_coding Homo_sapiens 0 856
ENST00000393214 AC004386.4-001 processed_pseudogene Homo_sapiens 0 549
ENST00000397390 RP11-146N23.1-001 processed_pseudogene Homo_sapiens 0 433
ENST00000463969 RP11-864G5.1-001 processed_pseudogene Homo_sapiens 0 597
ENST00000464444 AD000092.3-001 processed_pseudogene Homo_sapiens 0 688
ENST00000475592 RP11-392P7.1-001 processed_pseudogene Homo_sapiens 0 691
ENST00000479691 RPS6P16-001 processed_pseudogene Homo_sapiens 0 521
ENST00000498815 RPS6-005 processed_transcript Homo_sapiens 0 303

Loading