C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 10364
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000076633 Gm10364-002 ENSMUSG00000072492 10090 + 14:55038462-55042979 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastLiverLungMuscleOvaryPlacentaTestisENSMUST00000076633
Transcript ID Adipose Bladder Brain Breast Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000076633 0.086±0.05 0.112±0.03 0.197±0.16 0.228±0.18 0.036±0.02 0.064±0.01 0.077±0.03 0.227±0.19 0.122±0.06 0.039±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090C CIL_00090C_0002 VISTA 14:54638004-55241428
CIL_0009BW CIL_0009BW_0002 VISTA 14:54696106-55297707
CIL_0008Q4 CIL_0008Q4_0002 VISTA 14:54696894-55297224
CIL_0008QH CIL_0008QH_0002 VISTA 14:54703667-55304830

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 952
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 872
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 944
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 952
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 952
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 640
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 734
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 680
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 0 243
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 457
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 673
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 606
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 797
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 695
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 520
ENST00000429913 GAPDHP29-001 processed_pseudogene Homo_sapiens 0 425
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 466
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 592
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 532
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 484
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 396
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 837
ENST00000455134 GAPDHP28-001 processed_pseudogene Homo_sapiens 0 603
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 453
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 725
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 725
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 521
ENST00000489113 GAPDHP47-001 processed_pseudogene Homo_sapiens 0 496
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 630
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 660
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 686
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 704
ENST00000509132 GAPDHP66-001 processed_pseudogene Homo_sapiens 0 407
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 512
ENST00000510160 CTD-2046J7.1-001 processed_pseudogene Homo_sapiens 0 207
ENST00000512110 AC007016.3-001 processed_pseudogene Homo_sapiens 0 219
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 351
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 725
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 689
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 481
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 628
ENST00000520713 ANKRD46-009 processed_transcript Homo_sapiens 0 544
ENST00000524319 ANKRD46-003 processed_transcript Homo_sapiens 0 544
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 422
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 850

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