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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | chromobox homolog 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000481057  |
CBX3-005 |
ENSG00000122565 |
9606 | + |
7:26208133-26212423  |
retained_intron |
|
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008Q3 | CIL_0008Q3_0001 | VISTA | 7:25714231-26318034 |
| CIL_000874 | CIL_000874_0001 | VISTA | 7:25760923-26361842 |
| CIL_0002CP | CIL_0002CP_0001 | CGP | 7:26152240-26201529 |
| CIL_0009DE | CIL_0009DE_0001 | VISTA | 7:26185042-26786016 |
| CIL_0002CO | CIL_0002CO_0001 | CGP | 7:26189927-26213356 |
| CIL_0007OD | CIL_0007OD_0001 | UCNEbase | 7:26191819-26506343 |
| CIL_0002CN | CIL_0002CN_0001 | CGP | 7:26201162-26374329 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000114446
|
Cbx3-005 | protein_coding | Mus_musculus | 0 | 608 |
|
ENSMUST00000031862
|
Cbx3-002 | protein_coding | Mus_musculus | 0 | 608 |
|
ENSMUST00000094623
|
Cbx3-001 | protein_coding | Mus_musculus | 0 | 608 |
|
ENSMUST00000081455
|
Gm10068-001 | processed_pseudogene | Mus_musculus | 0 | 483 |
|
ENSMUST00000181108
|
Gm6984-001 | processed_pseudogene | Mus_musculus | 0 | 477 |
|
ENSMUST00000091531
|
Gm5196-201 | processed_pseudogene | Mus_musculus | 0 | 438 |
|
ENSMUST00000091539
|
Gm6917-201 | processed_pseudogene | Mus_musculus | 0 | 438 |
|
ENSMUST00000188772
|
Als2cr12-002 | protein_coding | Mus_musculus | 0 | 381 |
|
ENSMUST00000185597
|
RP23-304F24.1-001 | processed_pseudogene | Mus_musculus | 0 | 363 |
|
ENSMUST00000190083
|
RP23-231B19.1-001 | processed_pseudogene | Mus_musculus | 0 | 351 |
|
ENSMUST00000141711
|
Cbx3-007 | protein_coding | Mus_musculus | 0 | 244 |
