C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin, heavy polypeptide 13, skeletal muscle
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000081911 Myh13-201 ENSMUSG00000060180 10090 + 11:67327103-67371502 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastKidneyLiverLungOvaryPlacentaTestisENSMUST00000081911
Transcript ID Brain Breast Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000081911 0.006±0.00 0.217±0.14 0.006±0.00 0.004±0.00 0.162±0.03 0.028±0.02 0.110±0.16 0.154±0.21

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003774 IEA motor activity
GO:0003779 IEA actin binding
GO:0005524 IEA ATP binding
GO:0008152 IEA metabolic process
GO:0009267 IDA cellular response to starvation
GO:0016459 IEA myosin complex
GO:0030016 IDA myofibril

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000051360 MYH13 (3 of 10)-201 protein_coding Danio_rerio 0 3081
ENSDART00000098060 myhz1.1-201 protein_coding Danio_rerio 0 3042
ENSDART00000123003 myhz1.1-001 protein_coding Danio_rerio 0 3042
ENSDART00000098072 myhz1.1-202 protein_coding Danio_rerio 0 3033
ENSDART00000122889 myhz1.3-001 protein_coding Danio_rerio 0 3022
ENSDART00000051362 myhc4-201 protein_coding Danio_rerio 0 3016
ENSDART00000125917 myhc4-001 protein_coding Danio_rerio 0 3011
ENSDART00000109263 myhz1.1-203 protein_coding Danio_rerio 0 3001
ENSDART00000098067 myhz1.2-201 protein_coding Danio_rerio 0 2998
ENSDART00000131983 myhz1.2-001 protein_coding Danio_rerio 0 2998
ENSDART00000051361 myhz2-201 protein_coding Danio_rerio 0 2994
ENSDART00000126873 myhz2-001 protein_coding Danio_rerio 0 2994
ENSDART00000139917 myha-001 protein_coding Danio_rerio 0 2933
ENSDART00000156295 myhb-001 protein_coding Danio_rerio 0 2750
ENSDART00000026257 myhb-201 protein_coding Danio_rerio 0 2739
ENSDART00000137989 CU633479.5-201 protein_coding Danio_rerio 0 2457
ENSDART00000056853 smyhc1-203 protein_coding Danio_rerio 0 2423
ENSDART00000133338 CR450736.2-201 protein_coding Danio_rerio 0 2409
ENSDART00000066527 smyhc3-201 protein_coding Danio_rerio 0 2409
ENSDART00000150060 smyhc3-001 protein_coding Danio_rerio 0 2409
ENSDART00000150162 si:ch211-24n20.3-001 protein_coding Danio_rerio 0 2398
ENSDART00000056849 smyhc2-001 protein_coding Danio_rerio 0 2396
ENSDART00000123920 MYH13 (5 of 10)-202 protein_coding Danio_rerio 0 2388
ENSDART00000137082 CU633479.6-201 protein_coding Danio_rerio 0 2386
ENSDART00000135233 si:ch211-24n20.3-201 protein_coding Danio_rerio 0 2364
ENSDART00000099532 vmhc-001 protein_coding Danio_rerio 0 2185
ENSDART00000128784 vmhcl-001 protein_coding Danio_rerio 0 1626
ENSDART00000078958 vmhcl-201 protein_coding Danio_rerio 0 1568
ENSDART00000135295 MYH13 (9 of 10)-201 protein_coding Danio_rerio 0 1555
ENSDART00000075210 protein_coding Danio_rerio 0 1472
ENSDART00000130531 myhz1.3-202 protein_coding Danio_rerio 0 1452
ENSDART00000045928 smyhc1-202 protein_coding Danio_rerio 0 1190
ENSDART00000004536 smyhc1-201 protein_coding Danio_rerio 0 1170
ENSDART00000130036 MYH13 (5 of 10)-201 protein_coding Danio_rerio 0 1040
ENSDART00000127125 myhz1.3-201 protein_coding Danio_rerio 0 619
ENSDART00000098111 myha-201 protein_coding Danio_rerio 0 420
ENSDART00000123565 vmhcl-004 protein_coding Danio_rerio 0 331
ENSDART00000141922 vmhcl-002 protein_coding Danio_rerio 0 207
ENSDART00000004854 myh11b-201 protein_coding Danio_rerio 4.06377e-44 185
ENSDART00000148622 myh11b-001 protein_coding Danio_rerio 4.06377e-44 185
ENSDART00000149020 si:ch211-158m24.12-001 protein_coding Danio_rerio 1e-23 117
ENST00000226207 MYH1-001 protein_coding Homo_sapiens 0 4032
ENST00000245503 MYH2-001 protein_coding Homo_sapiens 0 3757
ENST00000252172 MYH13-001 protein_coding Homo_sapiens 0 7324
ENST00000255381 MYH4-001 protein_coding Homo_sapiens 0 3749
ENST00000262873 MYH7B-001 protein_coding Homo_sapiens 0 686
ENST00000273353 MYH15-001 protein_coding Homo_sapiens 0.00000000000001 88
ENST00000355349 MYH7-001 protein_coding Homo_sapiens 0 3094
ENST00000356287 MYH6-001 protein_coding Homo_sapiens 0 3127
ENST00000376970 MYH14-202 protein_coding Homo_sapiens 1e-29 137
ENST00000397183 MYH2-201 protein_coding Homo_sapiens 0 3757
ENST00000403437 MYH8-001 protein_coding Homo_sapiens 0 3692
ENST00000405093 MYH6-201 protein_coding Homo_sapiens 0 3127
ENST00000413734 MYH16-003 processed_transcript Homo_sapiens 0 364
ENST00000418404 MYH13-003 protein_coding Homo_sapiens 0 7324
ENST00000420805 MYH2-002 protein_coding Homo_sapiens 0 411
ENST00000425460 MYH14-203 protein_coding Homo_sapiens 1e-29 137
ENST00000439784 MYH16-001 unitary_pseudogene Homo_sapiens 0 693
ENST00000440075 MYH14-204 protein_coding Homo_sapiens 2e-26 126
ENST00000470929 MYH7B-002 retained_intron Homo_sapiens 1e-33 148
ENST00000478998 MYH15-002 retained_intron Homo_sapiens 0.000000000000006 88
ENST00000532183 MYH2-006 protein_coding Homo_sapiens 0 1631
ENST00000557461 MYH6-002 retained_intron Homo_sapiens 0 1027
ENST00000578017 MYH2-009 protein_coding Homo_sapiens 0 534
ENST00000579489 MYH3-004 retained_intron Homo_sapiens 0 350
ENST00000583535 MYH3-001 protein_coding Homo_sapiens 0 3428
ENST00000596571 MYH14-008 protein_coding Homo_sapiens 1e-29 137
ENST00000598205 MYH14-006 protein_coding Homo_sapiens 1e-29 137
ENST00000599920 MYH14-007 protein_coding Homo_sapiens 5e-30 137
ENST00000601313 MYH14-001 protein_coding Homo_sapiens 1e-29 137
ENST00000618182 MYH7B-201 protein_coding Homo_sapiens 0 686
ENST00000621918 MYH13-201 protein_coding Homo_sapiens 0 7324
ENST00000622564 MYH2-202 protein_coding Homo_sapiens 0 1631

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